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BaseInfo

ncRNA ID novel_gma_miR9270
Species Glycine max
Class miRNA
Genome position Chr9:17251581-17251686 [-]
Reference genome Glycine_max_v2.0
Source SRR1451625
Length 24
Mature sequence(if miRNA) 83 - UUUCAAAUAACCGUCUUAGAAAGU - 106
Stem-loop(if miRNA) --                        CUUUUAUUGU          A          A
  UUUCAAAUAACCGUCUUAGAAAGU          GUAUAUUCUA GACGGUUAUU A
  ||||||||||||||||||||||||          |||||||||| ||||||||||
  AAAGUUUAUUGGCAGAAUCUUUCA          CAUGUAAGAU CUGUCAGUAA G
AU                        ----------          C          A
Stem-loop sequence UUUCAAAUAACCGUCUUAGAAAGUCUUUUAUUGUGUAUAUUCUAAGACGGUUAUUAAGAAAUGACUGUCCUAGAAUGUACACUUUCUAAGACGGUUAUUUGAAAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771087.1
ncRNA:24   UGAAAGAUUCUGCCAAUAAACUUU   1
  ||*|||||||||||||*|||||||
targets:2513   ACAUUCUAAGACGGUUCUUUGAAA   2536

1.5 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget
XM_003534913.2
ncRNA:24   UGA-----AAGAUUCUGCCAAUAAACUUU   1
  |=|-----|||*|||||||||||||*|||
targets:132   AUUGUAAGUUCAAAGACGGUUAUUUAAAA   160

2.5 PREDICTED: Glycine max uncharacterized LOC100781107 (LOC100781107), mRNA uncharacterized LOC100781107(LOC100781107) coding protein psRNATarget