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BaseInfo

ncRNA ID novel_gma_miR9266
Species Glycine max
Class miRNA
Genome position Chr6:13407363-13407420 [+]
Reference genome Glycine_max_v2.0
Source SRR1451625
Length 21
Mature sequence(if miRNA) 38 - AUUACCUGUCACAUGAAGAUU - 58
Stem-loop(if miRNA) --   C               -     UA
  UCU CAUGUGACAGGUAAU GAGUU  A
  ||| ||||||||||||||| |||||  U
  AGA GUACACUGUCCAUUA CUCAA  U
UU   A               A     CU
Stem-loop sequence UCUCCAUGUGACAGGUAAUGAGUUUAAUUUCAACUCAAUUACCUGUCACAUGAAGAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003536185.3
ncRNA:21   UUAGAAGUACACUGUCCAUUA   1
  *|*|||||||||||||*||||
targets:22   CAGCUUCAUGUGACAGCUAAU   42

2.5 PREDICTED: Glycine max uncharacterized LOC100798639 (LOC100798639), transcript variant X2, mRNA uncharacterized LOC100798639(LOC100798639) coding protein psRNATarget
XM_006589225.2
ncRNA:21   UUAGAAGUACACUGUCCAUUA   1
  *|*|||||||||||||*||||
targets:35   CAGCUUCAUGUGACAGCUAAU   55

2.5 PREDICTED: Glycine max uncharacterized LOC100798639 (LOC100798639), transcript variant X1, mRNA uncharacterized LOC100798639(LOC100798639) coding protein psRNATarget