ncRNA ID | novel_gma_miR9264 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:18887058-18887196 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451625 |
Length | 24 |
Mature sequence(if miRNA) | 116 - UGAACAAACUUUCUCUUAUUGAUU - 139 |
Stem-loop(if miRNA) |
--U               U    A                AUG C      U  U   UUCAACAUCAUA    GAACAAACUUUCUCU AUUG UUAAAAUUUAUUAAAA   A AAAAUU UG AGG            U    ||||||||||||||| |||| ||||||||||||||||   | |||||| || |||            U    UUUGUUUGAGAGAGA UAAC AAUUUUAAAUAAUUUU   U UUUUAG AC UCU            U AGG               U    C                -AA A      U  -   UAAAAAAAAUAA |
Stem-loop sequence | UGAACAAACUUUCUCUUAUUGAUUAAAAUUUAUUAAAAAUGACAAAAUUUUGUAGGUUCAACAUCAUAUUUAAUAAAAAAAAUUCUCAUGAUUUUAUAAUUUUAAUAAAUUUUAACCAAUUAGAGAGAGUUUGUUUGGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003532708.3 |
|
2.5 | PREDICTED: Glycine max probable LRR receptor-like serine/threonine-protein kinase MRH1 (LOC100786591), transcript variant X2, mRNA | probable LRR receptor-like serine/threonine-protein kinase MRH1(LOC100786591) | coding protein | psRNATarget | |||||||||
XM_006585107.2 |
|
2.5 | PREDICTED: Glycine max probable LRR receptor-like serine/threonine-protein kinase MRH1 (LOC100786591), transcript variant X1, mRNA | probable LRR receptor-like serine/threonine-protein kinase MRH1(LOC100786591) | coding protein | psRNATarget |