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BaseInfo

ncRNA ID novel_gma_miR9262
Species Glycine max
Class miRNA
Genome position Chr4:16543579-16543778 [-]
Reference genome Glycine_max_v2.0
Source SRR1451625
Length 24
Mature sequence(if miRNA) 177 - UUUCAAAAAACCGAUGUUAACUGU - 200
Stem-loop(if miRNA) -----UUU  A               U  CAACA    CACAU  -               CUGUA               -     G              U
        CA AAAACCGAUGUUAAC GU     UUAA     AC GUUAACAUCGGUUUU     AAAAACCGAUGUUAA GUAAC UUAACAUCGGUUUU C
        || ||||||||||||||| ||     ||||     || |||||||||||||||     ||||||||||||||| ||||| |||||||||||||| C
        GU UUUUGGCUACAAUUG CA     AAUU     UG CAAUUGUAGCCAAAA     UUUUUGGCUACAAUU CAUUG AAUUGUAGCUAAAA A
AAAAAAAU  C               -  UACAC    ACAAC  U               AAACC               G     -              A
Stem-loop sequence UUUCAAAAAACCGAUGUUAACUGUCAACAUUAACACAUACGUUAACAUCGGUUUUCUGUAAAAAACCGAUGUUAAGUAACGUUAACAUCGGUUUUUCCAAAAAAUCGAUGUUAAGUUACGUUAACAUCGGUUUUUCCAAAAAAACCGAUGUUAACUGUCAACAUUAACACAUACGUUAACAUCGGUUUUCUGUAAAAAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB171004.1
ncRNA:24   UGUCAAUUGUAGCCAAAAAACUUU   1
  |||*||||||||||||||||*|||
targets:16   ACAUUUAACAUCGGUUUUUUAAAA   39

1.5 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget
JB171004.1
ncRNA:24   UGUCAAUUGUAGCCAAAAAACUUU   1
  |||*||||||||||||||||*|||
targets:117   ACAUUUAACAUCGGUUUUUUAAAA   140

1.5 Sequence 8668 from Patent EP2559767 NA coding protein psRNATarget
LQ242673.1
ncRNA:24   UGUCAAUUGUAGCCAAAAAACUUU   1
  |||*||||||||||||||||*|||
targets:16   ACAUUUAACAUCGGUUUUUUAAAA   39

1.5 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
LQ242673.1
ncRNA:24   UGUCAAUUGUAGCCAAAAAACUUU   1
  |||*||||||||||||||||*|||
targets:117   ACAUUUAACAUCGGUUUUUUAAAA   140

1.5 Sequence 8668 from Patent EP2985353 NA coding protein psRNATarget
HI410543.1
ncRNA:24   UGUCAAUUGUAGCCAAAAAACUUU   1
  |||*||||||||||||||||*|||
targets:16   ACAUUUAACAUCGGUUUUUUAAAA   39

1.5 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget
HI410543.1
ncRNA:24   UGUCAAUUGUAGCCAAAAAACUUU   1
  |||*||||||||||||||||*|||
targets:117   ACAUUUAACAUCGGUUUUUUAAAA   140

1.5 Sequence 8668 from Patent EP2074227 NA coding protein psRNATarget