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BaseInfo

ncRNA ID novel_gma_miR9257
Species Glycine max
Class miRNA
Genome position Chr17:13200711-13200857 [+]
Reference genome Glycine_max_v2.0
Source SRR1451625
Length 24
Mature sequence(if miRNA) 1 - UUAACGUCCGGAUAUAUUUGUCAC - 24
Stem-loop(if miRNA) --U      CC              ----------------CA    UUACACUUUUGAGGACUAAAUUUUGUAUUUUUCA
   UAACGU  GGAUAUAUUUGUCA                  CUUU                                  U
   ||||||  ||||||||||||||                  ||||                                  C
   GUUGUA  CCUGUAUAAACAGU                  AAAG                                  U
ACG      UA              AUAUUAUAAAAGAACUAA    CAAAAAGGUGAGACAACUGUUUACACAGGGAUUU
Stem-loop sequence UUAACGUCCGGAUAUAUUUGUCACACUUUUUACACUUUUGAGGACUAAAUUUUGUAUUUUUCAUCUUUUAGGGACACAUUUGUCAACAGAGUGGAAAAACGAAAAAUCAAGAAAAUAUUAUAUGACAAAUAUGUCCAUAUGUUGGCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014779236.1
ncRNA:24   CACUGUUUAUAUAGGCCUGCAAUU   1
  ||*||||||||||||||*||||||
targets:1620   GUAACAAAUAUAUCCGGUCGUUAA   1643

1.5 PREDICTED: Glycine max hyoscyamine 6-dioxygenase-like (LOC106799769), transcript variant X1, mRNA hyoscyamine 6-dioxygenase-like(LOC106799769) coding protein psRNATarget