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BaseInfo

ncRNA ID novel_gma_miR9252
Species Glycine max
Class miRNA
Genome position Chr14:13885533-13885605 [-]
Reference genome Glycine_max_v2.0
Source SRR1451625
Length 24
Mature sequence(if miRNA) 50 - AUUCUAAGACGGUUUUGCGAAAAC - 73
Stem-loop(if miRNA) --      A          C               U
  AUUCUA GACGGUUUUG GAAAACCGUCUUAGA U
  |||||| |||||||||| ||||||||||||||| G
  UAAGAU CUGUCAAAAC CUUUUGGCAGAAUCU G
GA      G          A               U
Stem-loop sequence AUUCUAAGACGGUUUUGCGAAAACCGUCUUAGAUUGGUUCUAAGACGGUUUUCACAAAACUGUCGUAGAAUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771087.1
ncRNA:24   CAA-AAGCGUUUUGGCAGAAUCUUA   1
  |||-||=|*||||||||||||||||
targets:2526   GUUCUUUGAAAAACCGUCUUAGAAU   2550

2.0 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget
XM_006593679.2
ncRNA:24   CAAAAGCGUUUUGGCAGAAUCUUA   1
  |*|*|=||||=|||||||||||||
targets:462   GAUAUUGCAAGACCGUCUUAGAAU   485

2.0 PREDICTED: Glycine max uncharacterized protein sll0005-like (LOC100785321), transcript variant X7, mRNA uncharacterized protein sll0005-like(LOC100785321) coding protein psRNATarget
XM_006593677.2
ncRNA:24   CAAAAGCGUUUUGGCAGAAUCUUA   1
  |*|*|=||||=|||||||||||||
targets:459   GAUAUUGCAAGACCGUCUUAGAAU   482

2.0 PREDICTED: Glycine max uncharacterized protein sll0005-like (LOC100785321), transcript variant X5, mRNA uncharacterized protein sll0005-like(LOC100785321) coding protein psRNATarget
XM_014765258.1
ncRNA:24   CAAAAGCGUUUUGGCAGAAUCUUA   1
  |*|*|=||||=|||||||||||||
targets:460   GAUAUUGCAAGACCGUCUUAGAAU   483

2.0 PREDICTED: Glycine max uncharacterized protein sll0005-like (LOC100785321), transcript variant X4, mRNA uncharacterized protein sll0005-like(LOC100785321) coding protein psRNATarget
XM_006593681.2
ncRNA:24   CAAAAGCGUUUUGGCAGAAUCUUA   1
  |*|*|=||||=|||||||||||||
targets:446   GAUAUUGCAAGACCGUCUUAGAAU   469

2.0 PREDICTED: Glycine max uncharacterized protein sll0005-like (LOC100785321), transcript variant X9, mRNA uncharacterized protein sll0005-like(LOC100785321) coding protein psRNATarget
XM_014765257.1
ncRNA:24   CAAAAGCGUUUUGGCAGAAUCUUA   1
  |*|*|=||||=|||||||||||||
targets:457   GAUAUUGCAAGACCGUCUUAGAAU   480

2.0 PREDICTED: Glycine max uncharacterized protein sll0005-like (LOC100785321), transcript variant X1, mRNA uncharacterized protein sll0005-like(LOC100785321) coding protein psRNATarget