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BaseInfo

ncRNA ID novel_gma_miR9247
Species Glycine max
Class miRNA
Genome position Chr9:22338395-22338485 [-]
Reference genome Glycine_max_v2.0
Source SRR1451624
Length 24
Mature sequence(if miRNA) 1 - AAGCAACUUGAAAGUGUAGGAAGU - 24
Stem-loop(if miRNA) --         CUCC             GCACCA     ---A      C
  UUCCUGCAC    CAAGUUGUUUCUU      CCUUU    UGGUUU C
  |||||||||    |||||||||||||      |||||    |||||| A
  AAGGAUGUG    GUUCAACGAAGGA      GGAAG    ACUAAG G
UG         -AAA             ------     ACUG      G
Stem-loop sequence UUCCUGCACCUCCCAAGUUGUUUCUUGCACCACCUUUAUGGUUUCCAGGGAAUCAGUCAGAAGGAGGAAGCAACUUGAAAGUGUAGGAAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003535079.3
ncRNA:24   UGAAGGAUGUGAAAGUUCAACGAA   1
  ||||||||||||||||||||||||
targets:87   ACUUCCUACACUUUCAAGUUGCUU   110

0.0 PREDICTED: Glycine max uncharacterized LOC100796667 (LOC100796667), mRNA uncharacterized LOC100796667(LOC100796667) coding protein psRNATarget