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BaseInfo

ncRNA ID novel_gma_miR9245
Species Glycine max
Class miRNA
Genome position Chr8:4372110-4372178 [-]
Reference genome Glycine_max_v2.0
Source SRR1451624
Length 21
Mature sequence(if miRNA) 49 - AUUUUCAUGUGGGAUCCAAUA - 69
Stem-loop(if miRNA) --AUU               A     AA GA    
     UUCAUGUGGGAUCCA UAAAU  G  GUGGU
     ||||||||||||||| |||||  |  ||||A
     AAGUACAUCCUGGGU AUUUA  C  CACCC
ACUUU               G     -- UA    
Stem-loop sequence AUUUUCAUGUGGGAUCCAAUAAAUAAGGAGUGGUACCCACAUCAUUUAGUGGGUCCUACAUGAAUUUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014767202.1
ncRNA:21   AUAACCUAGGGUGUACUUUUA   1
  |*|||*||=||||||||||||
targets:1578   UUUUGAAUUCCACAUGAAAAU   1598

2.5 PREDICTED: Glycine max probable protein phosphatase 2C 12 (LOC100778367), transcript variant X4, mRNA probable protein phosphatase 2C 12(LOC100778367) coding protein psRNATarget
XM_006595903.2
ncRNA:21   AUAACCUAGGGUGUACUUUUA   1
  |*|||*||=||||||||||||
targets:1676   UUUUGAAUUCCACAUGAAAAU   1696

2.5 PREDICTED: Glycine max probable protein phosphatase 2C 12 (LOC100778367), transcript variant X5, mRNA probable protein phosphatase 2C 12(LOC100778367) coding protein psRNATarget
XM_014767201.1
ncRNA:21   AUAACCUAGGGUGUACUUUUA   1
  |*|||*||=||||||||||||
targets:1780   UUUUGAAUUCCACAUGAAAAU   1800

2.5 PREDICTED: Glycine max probable protein phosphatase 2C 12 (LOC100778367), transcript variant X3, mRNA probable protein phosphatase 2C 12(LOC100778367) coding protein psRNATarget
XM_014767200.1
ncRNA:21   AUAACCUAGGGUGUACUUUUA   1
  |*|||*||=||||||||||||
targets:1788   UUUUGAAUUCCACAUGAAAAU   1808

2.5 PREDICTED: Glycine max probable protein phosphatase 2C 12 (LOC100778367), transcript variant X2, mRNA probable protein phosphatase 2C 12(LOC100778367) coding protein psRNATarget
XM_003545259.3
ncRNA:21   AUAACCUAGGGUGUACUUUUA   1
  |*|||*||=||||||||||||
targets:1797   UUUUGAAUUCCACAUGAAAAU   1817

2.5 PREDICTED: Glycine max probable protein phosphatase 2C 12 (LOC100778367), transcript variant X1, mRNA probable protein phosphatase 2C 12(LOC100778367) coding protein psRNATarget