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BaseInfo

ncRNA ID novel_gma_miR9239
Species Glycine max
Class miRNA
Genome position Chr1:36999861-36999957 [+]
Reference genome Glycine_max_v2.0
Source SRR1294478
Length 24
Mature sequence(if miRNA) 74 - UUCUAAGACGGUCUUUGGCACAUG - 97
Stem-loop(if miRNA) --   A                    AUUA     A  C      - GU
  UGU CCAAAGACUGUCUUAGAAUG    ACAUU UA AUCGGU C  C
  ||| ||||||||||||||||||||    ||||| || |||||| |
  ACA GGUUUCUGGCAGAAUCUUAC    UGUAA AU UAGCCA G  A
GU   C                    AACC     G  A      A AG
Stem-loop sequence UGUACCAAAGACUGUCUUAGAAUGAUUAACAUUAUACAUCGGUCGUCAGAGAACCGAUAUAGAAUGUCCAACAUUCUAAGACGGUCUUUGGCACAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014762037.1
ncRNA:24   GUACACGGUUUCUGGCAGAAUCUU   1
  ||*|||=*||=|||||||||||||
targets:880   CACGUGUAAAGGACCGUCUUAGAA   903

3.0 PREDICTED: Glycine max putative DUF21 domain-containing protein At1g03270 (LOC102659380), mRNA putative DUF21 domain-containing protein At1g03270(LOC102659380) coding protein psRNATarget