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BaseInfo

ncRNA ID novel_gma_miR9232
Species Glycine max
Class miRNA
Genome position Chr20:33066218-33066280 [+]
Reference genome Glycine_max_v2.0
Source SRR1451624
Length 24
Mature sequence(if miRNA) 1 - UCUGAGUGCAUACUUGAUUGUGGU - 24
Stem-loop(if miRNA) --  UG        - U   UU       AAU
  UC  AGUGCAUA C UGA  GUGGUGG   U
  ||  |||||||| | |||  |||||||
  AG  UCAUGUGU G ACU  CGCUACU   C
AG  GU        U U   UU       GUA
Stem-loop sequence UCUGAGUGCAUACUUGAUUGUGGUGGAAUUCAUGUCAUCGCUUUCAUGUUGUGUACUUGGAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001255633.1
ncRNA:24   UGGUGUUAGUUCAUACGUGAGUCU   1
  *|=*=|||||||||||||=||||*
targets:166   UCUCUAAUCAAGUAUGCAUUCAGU   189

2.5 Glycine max auxin-induced protein PCNT115-like (LOC100779689), mRNA auxin-induced protein PCNT115-like(LOC100779689) coding protein psRNATarget
BT095792.1
ncRNA:24   UGGUGUUAGUUCAUACGUGAGUCU   1
  *|=*=|||||||||||||=||||*
targets:166   UCUCUAAUCAAGUAUGCAUUCAGU   189

2.5 Soybean clone JCVI-FLGm-19L4 unknown mRNA NA coding protein psRNATarget