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BaseInfo

ncRNA ID novel_gma_miR9220
Species Glycine max
Class miRNA
Genome position Chr13:14107940-14108020 [+]
Reference genome Glycine_max_v2.0
Source SRR1451624
Length 24
Mature sequence(if miRNA) 1 - UUGGGCUGAUUGUCACUUUGUUUC - 24
Stem-loop(if miRNA) ---U GG     UU   A   UG    -  ---    GC U  A
    U  GCUGA  GUC CUU  UUUC AG   GUGA  C UC U
    |  |||||  ||| |||  |||| ||   ||||  | ||
    G  UGAUU  CAG GAG  AGAG UC   CACU  G AG A
UAGU UU     --   A   GU    A  GUA    GA U  U
Stem-loop sequence UUGGGCUGAUUGUCACUUUGUUUCAGGUGAGCCUUCAUAUGAUGAGUCACAUGCUAGAGAUGGAGAGACUUAGUUUGUGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006584626.2
ncRNA:24   CUUUGUUUCACUGUUAGUCGGGUU   1
  ****||||||||*||||||||||*
targets:347   AUCUCAAAGUGAAAAUCAGCCCAU   370

2.5 PREDICTED: Glycine max ADP-ribosylation factor GTPase-activating protein AGD3-like (LOC102664321), mRNA ADP-ribosylation factor GTPase-activating protein AGD3-like(LOC102664321) coding protein psRNATarget