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BaseInfo

ncRNA ID novel_gma_miR9199
Species Glycine max
Class miRNA
Genome position Chr18:36796046-36796213 [-]
Reference genome Glycine_max_v2.0
Source SRR1451623;SRR1451627
Length 24
Mature sequence(if miRNA) 145 - AAACCGAUGUAGAAUUCAUGACAU - 168
Stem-loop(if miRNA) AAAC           -U     C        U     --AAUUA    ACCGAUGUUAAAUUAUGGAAAUCUACAUCGGUCCAUG
    CGAUGUAGAAU  CAUGA AUUCUACA CGGUU       GACA                                     C
    |||||||||||  ||||| |||||||| |||||       ||||
    GCUACAUCUUA  GUACU UAAGAUGU GCCAG       ACCU                                     C
CUUU           CU     -        U     CGAACCA    GACUACAUCUAACCGAAGAUAAGAUGAUGCCAGGGAA
Stem-loop sequence AAACCGAUGUAGAAUUCAUGACAUUCUACAUCGGUUAAUUAGACAACCGAUGUUAAAUUAUGGAAAUCUACAUCGGUCCAUGCCAAGGGACCGUAGUAGAAUAGAAGCCAAUCUACAUCAGUCCAACCAAGCGACCGUUGUAGAAUUCAUGUCAUUCUACAUCGUUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003539359.3
ncRNA:24   UACAGUACUUAAGAUGUAGCCAAA   1
  |*||||||*||||||||||||||*
targets:2799   AAGUCAUGCAUUCUACAUCGGUUC   2822

2.0 PREDICTED: Glycine max MLO-like protein 6 (LOC100776714), mRNA MLO-like protein 6(LOC100776714) coding protein psRNATarget
XM_006576039.1
ncRNA:24   UACAGUACUUAAGAUGUAGCCAAA   1
  *||--|||||||||||*||||||*
targets:584   CUG--AUGAAUUCUACUUCGGUUG   605

2.5 PREDICTED: Glycine max protein ASPARTIC PROTEASE IN GUARD CELL 2-like (LOC102662911), mRNA protein ASPARTIC PROTEASE IN GUARD CELL 2-like(LOC102662911) coding protein psRNATarget