ncRNA ID | novel_gma_miR9199 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:36796046-36796213 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451623;SRR1451627 |
Length | 24 |
Mature sequence(if miRNA) | 145 - AAACCGAUGUAGAAUUCAUGACAU - 168 |
Stem-loop(if miRNA) |
AAAC           -U     C        U     --AAUUA    ACCGAUGUUAAAUUAUGGAAAUCUACAUCGGUCCAUG     CGAUGUAGAAU  CAUGA AUUCUACA CGGUU       GACA                                     C     |||||||||||  ||||| |||||||| |||||       ||||     GCUACAUCUUA  GUACU UAAGAUGU GCCAG       ACCU                                     C CUUU           CU     -        U     CGAACCA    GACUACAUCUAACCGAAGAUAAGAUGAUGCCAGGGAA |
Stem-loop sequence | AAACCGAUGUAGAAUUCAUGACAUUCUACAUCGGUUAAUUAGACAACCGAUGUUAAAUUAUGGAAAUCUACAUCGGUCCAUGCCAAGGGACCGUAGUAGAAUAGAAGCCAAUCUACAUCAGUCCAACCAAGCGACCGUUGUAGAAUUCAUGUCAUUCUACAUCGUUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003539359.3 |
|
2.0 | PREDICTED: Glycine max MLO-like protein 6 (LOC100776714), mRNA | MLO-like protein 6(LOC100776714) | coding protein | psRNATarget | |||||||||
XM_006576039.1 |
|
2.5 | PREDICTED: Glycine max protein ASPARTIC PROTEASE IN GUARD CELL 2-like (LOC102662911), mRNA | protein ASPARTIC PROTEASE IN GUARD CELL 2-like(LOC102662911) | coding protein | psRNATarget |