ncRNA ID | novel_gma_miR9192 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:41441881-41442087 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451623 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGCUAAUAACCGUCUUUGAAUGCC - 24 |
Stem-loop(if miRNA) |
--CU                U                 AU   AAA   U  CACACCU                AA          A        GCCUAUU     UUCAAAGACGGUUAUU GUUAAUAACCGUCUUUG  UGU   GUC GA       UUCAAAGACGGUUAUU  CUAAUAACCG CUUUGAAU       C     |||||||||||||||| |||||||||||||||||  |||   ||| ||       ||||||||||||||||  |||||||||| ||||||||       U     AAGUUUCUGCCAAUAA CGAUUAUUGGCAGAAAC  ACA   CAG CU       AAGUUUCUGCCAAUAA  GAUUAUUGGC GAAACUUG       G CCGU                U                 AU   ACA   U  CAAAUGU                AC          A        ACACACA |
Stem-loop sequence | CUUUCAAAGACGGUUAUUUGUUAAUAACCGUCUUUGAUUGUAAAGUCUGACACACCUUUCAAAGACGGUUAUUAACUAAUAACCGACUUUGAAUGCCUAUUCUGACACACAGUUCAAAGACGGUUAUUAGCAAAUAACCGUCUUUGAAUGUAAACUCUGACACAACAUACAAAGACGGUUAUUAGCUAAUAACCGUCUUUGAAUGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014775607.1 |
|
1.5 | PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA | protein MOR1(LOC102659664) | coding protein | psRNATarget | |||||||||
XM_014775607.1 |
|
1.5 | PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA | protein MOR1(LOC102659664) | coding protein | psRNATarget | |||||||||
XM_014775607.1 |
|
1.5 | PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA | protein MOR1(LOC102659664) | coding protein | psRNATarget |