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BaseInfo

ncRNA ID novel_gma_miR9192
Species Glycine max
Class miRNA
Genome position Chr1:41441881-41442087 [-]
Reference genome Glycine_max_v2.0
Source SRR1451623
Length 24
Mature sequence(if miRNA) 1 - AGCUAAUAACCGUCUUUGAAUGCC - 24
Stem-loop(if miRNA) --CU                U                 AU   AAA   U  CACACCU                AA          A        GCCUAUU
    UUCAAAGACGGUUAUU GUUAAUAACCGUCUUUG  UGU   GUC GA       UUCAAAGACGGUUAUU  CUAAUAACCG CUUUGAAU       C
    |||||||||||||||| |||||||||||||||||  |||   ||| ||       ||||||||||||||||  |||||||||| ||||||||       U
    AAGUUUCUGCCAAUAA CGAUUAUUGGCAGAAAC  ACA   CAG CU       AAGUUUCUGCCAAUAA  GAUUAUUGGC GAAACUUG       G
CCGU                U                 AU   ACA   U  CAAAUGU                AC          A        ACACACA
Stem-loop sequence CUUUCAAAGACGGUUAUUUGUUAAUAACCGUCUUUGAUUGUAAAGUCUGACACACCUUUCAAAGACGGUUAUUAACUAAUAACCGACUUUGAAUGCCUAUUCUGACACACAGUUCAAAGACGGUUAUUAGCAAAUAACCGUCUUUGAAUGUAAACUCUGACACAACAUACAAAGACGGUUAUUAGCUAAUAACCGUCUUUGAAUGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775607.1
ncRNA:24   CCGUAAGUUUCUGCCAAUAAUCGA   1
  *||||||||||=||||||||||||
targets:1652   AGCAUUCAAAGGCGGUUAUUAGCU   1675

1.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:24   CCGUAAGUUUCUGCCAAUAAUCGA   1
  **|||||||||||||||||||*||
targets:1487   AACAUUCAAAGACGGUUAUUAACU   1510

1.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:24   CCGUAAGUUUCUGCCAAUAAUCGA   1
  **|||||||||||||||||||*||
targets:1542   AACAUUCAAAGACGGUUAUUAACU   1565

1.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget