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BaseInfo

ncRNA ID	novel_gma_miR9187
Species	Glycine max
Class	miRNA
Genome position	Chr15:4359910-4360126 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451623
Length	22
Mature sequence(if miRNA)	1 - CAAACUUAUCCCUUUUAGUCCC - 22
Stem-loop(if miRNA)	--               --     C                A        ACC C                   UC         C  A UG     A  C     CUA   CAAACUUAUCCCUUU  UAGUC CUAUAGUUAAUAAGUG AUUUUUUA   C UGAAGUUUACAUUUUAAUU  CAAAAGGUC CU U  UUAAA UU UUUAA   A   |||||||||||||||  ||||| |||||||||||||||| ||||||||   | |||||||||||||||||||  ||||||||| || |  ||||| || |||||   C   GUUUGAAUAGGGAAA  AUCAG GAUAUCAAUUAUUCAC UAAAAAAU   G ACUUUAAAUGUAAAAUUAA  GUUUUCCAG GA A  AAUUU AA AAAUU   A AA               AA     A                C        CAA C                   GA         A  C GU     A  A     AAG
Stem-loop sequence	CAAACUUAUCCCUUUUAGUCCCUAUAGUUAAUAAGUGAAUUUUUUAACCCCUGAAGUUUACAUUUUAAUUUCCAAAAGGUCCCUAUUGUUAAAAUUCUUUAACUAACAGAAUUAAAAAAAUUUAAUGACAGAGACCUUUUGAGAAUUAAAAUGUAAAUUUCACGAACUAAAAAAUCCACUUAUUAACUAUAGAGACUAAAAAAGGGAUAAGUUUGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003538918.3	ncRNA:22   CCCUGAUUUUCCCUAUUCAAAC   1   **|||*|=|||||||||||||* targets:715   UUGACAAGAAGGGAUAAGUUUA   736 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100812718 (LOC100812718), transcript variant X4, mRNA	uncharacterized LOC100812718(LOC100812718)	coding protein	psRNATarget
XM_006590744.2	ncRNA:22   CCCUGAUUUUCCCUAUUCAAAC   1   **|||*|=|||||||||||||* targets:716   UUGACAAGAAGGGAUAAGUUUA   737 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100812718 (LOC100812718), transcript variant X3, mRNA	uncharacterized LOC100812718(LOC100812718)	coding protein	psRNATarget
XM_006590742.2	ncRNA:22   CCCUGAUUUUCCCUAUUCAAAC   1   **|||*|=|||||||||||||* targets:716   UUGACAAGAAGGGAUAAGUUUA   737 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100812718 (LOC100812718), transcript variant X1, mRNA	uncharacterized LOC100812718(LOC100812718)	coding protein	psRNATarget
XM_006590743.2	ncRNA:22   CCCUGAUUUUCCCUAUUCAAAC   1   **|||*|=|||||||||||||* targets:730   UUGACAAGAAGGGAUAAGUUUA   751 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100812718 (LOC100812718), transcript variant X2, mRNA	uncharacterized LOC100812718(LOC100812718)	coding protein	psRNATarget