ncRNA ID | novel_gma_miR9184 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:19107950-19108143 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451623 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CUUCCAGGAUCAAUGACUGAC - 21 |
Stem-loop(if miRNA) |
--UAA                CA  -AG  A  -   GUU     --CUCAAC    CUC  A    -------------A  ACUUCACGCGGUGGCAUUUCACUC      UCAUUGAUCCUGGAAG  GG   AA UG UUU   AGGUU        GGCU   AC CUAC              GC                        A      ||||||||||||||||  ||   || || |||   |||||        ||||   || ||||              ||                        A      AGUAACUAGGACCUUC  CC   UU AC AAA   UCCAG        CCGA   UG GAUG              CC                        C CAGUC                AC  GUA  A  U   AAC     AACCUUUC    ---  -    CCUCUCAAGACUGA  ACCUCCCAAAACUGGUUGUUCCUA |
Stem-loop sequence | UAAUCAUUGAUCCUGGAAGCAGGAGAAAUGUUUGUUAGGUUCUCAACGGCUCUCACACUACAGCACUUCACGCGGUGGCAUUUCACUCAACAUCCUUGUUGGUCAAAACCCUCCACCAGUCAGAACUCUCCGUAGGUAGCCCUUUCCAAGACCUCAAAAAUCAAUUAUGCCCACUUCCAGGAUCAAUGACUGAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006596649.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100820424 (LOC100820424), mRNA | uncharacterized LOC100820424(LOC100820424) | coding protein | psRNATarget | |||||||||
BT091775.1 |
|
3.0 | Soybean clone JCVI-FLGm-8F2 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
NM_001249711.1 |
|
3.0 | Glycine max uncharacterized LOC100526969 (LOC100526969), mRNA | uncharacterized LOC100526969(LOC100526969) | coding protein | psRNATarget | |||||||||
NM_001254138.2 |
|
3.0 | Glycine max uncharacterized LOC100786585 (LOC100786585), mRNA | uncharacterized LOC100786585(LOC100786585) | coding protein | psRNATarget | |||||||||
BT096129.1 |
|
3.0 | Soybean clone JCVI-FLGm-20M2 unknown mRNA | NA | coding protein | psRNATarget |