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BaseInfo

ncRNA ID novel_gma_miR9181
Species Glycine max
Class miRNA
Genome position Chr13:12626832-12626906 [+]
Reference genome Glycine_max_v2.0
Source SRR1451623
Length 22
Mature sequence(if miRNA) 1 - CCUUAACUUUAUUUUCAUCCUU - 22
Stem-loop(if miRNA) -    -      A     A       U      U   U
 CCUU AACUUU UUUUC UCCUUAC UUUAGU CCU A
 |||| |||||| ||||| ||||||| |||||| |||
 GGAA UUGAAA AAAAG AGGAAUG AAAUUA GGA A
A    A      A     C       U      -   A
Stem-loop sequence CCUUAACUUUAUUUUCAUCCUUACUUUUAGUUCCUUAAAAGGAUUAAAUGUAAGGACGAAAAAAAAGUUAAAGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006587412.2
ncRNA:22   UUCCUACUUUUAUUUCAAUUCC   1
  |||||||=||||||=|||||||
targets:246   AAGGAUGGAAAUAAGGUUAAGG   267

2.5 PREDICTED: Glycine max protein IQ-DOMAIN 1-like (LOC100787148), transcript variant X2, mRNA protein IQ-DOMAIN 1-like(LOC100787148) coding protein psRNATarget
XM_014762236.1
ncRNA:22   UUCCUACUUUUAUUUCAAUUCC   1
  |||||||=||||||=|||||||
targets:246   AAGGAUGGAAAUAAGGUUAAGG   267

2.5 PREDICTED: Glycine max protein IQ-DOMAIN 1-like (LOC100787148), transcript variant X1, mRNA protein IQ-DOMAIN 1-like(LOC100787148) coding protein psRNATarget