ncRNA ID | novel_gma_miR9177 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr8:11645355-11645446 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451622 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCCUCACCAUUCAUUUUCUUGAA - 24 |
Stem-loop(if miRNA) |
--   C    CA                    C    --AAA    A   AUC UCAC  UUCAUUUUCUUGAAAUUUAA GGUU     GAUU G   ||| ||||  |||||||||||||||||||| ||||     ||||   UAG AGUG  AAGUAAAAGAACUUUAGAUU CCAA     UUGA U AG   A    UG                    A    GAUUG    U |
Stem-loop sequence | AUCCUCACCAUUCAUUUUCUUGAAAUUUAACGGUUAAAGAUUAGUUAGUUGUUAGAACCAUUAGAUUUCAAGAAAAUGAAGUGUGAAGAUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003551240.3 |
|
2.5 | PREDICTED: Glycine max REF/SRPP-like protein At1g67360 (LOC100816931), transcript variant X2, mRNA | REF/SRPP-like protein At1g67360(LOC100816931) | coding protein | psRNATarget | |||||||||
AK245464.1 |
|
2.5 | Glycine max cDNA, clone: GMFL01-31-D03 | NA | coding protein | psRNATarget | |||||||||
XM_014770902.1 |
|
2.5 | PREDICTED: Glycine max REF/SRPP-like protein At1g67360 (LOC100816931), transcript variant X1, mRNA | REF/SRPP-like protein At1g67360(LOC100816931) | coding protein | psRNATarget |