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BaseInfo

ncRNA ID novel_gma_miR9172
Species Glycine max
Class miRNA
Genome position Chr20:9067754-9067794 [+]
Reference genome Glycine_max_v2.0
Source SRR1294477
Length 19
Mature sequence(if miRNA) 1 - UUGAGCGGGUGCCCUUUGC - 19
Stem-loop(if miRNA) --  G  - G       U  G
  UU AG C GGUGCCC UU C
  || || | ||||||| ||
  AG UC G UCACGGG AA U
GG  G  A A       C  A
Stem-loop sequence UUGAGCGGGUGCCCUUUGCUAAACGGGCACUAGACUGGAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014770587.1
ncRNA:19   CGUUUCCCGUGGGCGAGUU   1
  ||||||||||||=||||||
targets:741   GCAAAGGGCACCUGCUCAA   759

1.5 PREDICTED: Glycine max uncharacterized LOC106796944 (LOC106796944), mRNA uncharacterized LOC106796944(LOC106796944) coding protein psRNATarget
XM_006575952.1
ncRNA:19   CGUUUCCCGUGGGCGAGUU   1
  *|||||||=||||||||||
targets:276   ACAAAGGGUACCCGCUCAA   294

2.5 PREDICTED: Glycine max uncharacterized LOC102661549 (LOC102661549), mRNA uncharacterized LOC102661549(LOC102661549) coding protein psRNATarget