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BaseInfo

ncRNA ID novel_gma_miR9165
Species Glycine max
Class miRNA
Genome position Chr20:44542745-44542918 [-]
Reference genome Glycine_max_v2.0
Source SRR1294477
Length 24
Mature sequence(if miRNA) 151 - AAUAACCGUCUUUGAAUCUCGAGG - 174
Stem-loop(if miRNA)         -  -          GAGGAGAUGUAACUAUCAAAGGCGGUUAUUACAUAAUAACCGUCUUUGAAUGUCGAUCAGAGAUA
AAUAACCG UC UUUGAAUCUC                                                                 G
|||||||| || ||||||||||
UAUUAUUG CA AAACUUACAG                                                                 U
        A  A          CUAGUCUACAUUGUAAGUUUCUGCCAAUAAUACAUUAUUGGCAGAAACUUAGAGCUCCUCUACAU
Stem-loop sequence AAUAACCGUCUUUGAAUCUCGAGGAGAUGUAACUAUCAAAGGCGGUUAUUACAUAAUAACCGUCUUUGAAUGUCGAUCAGAGAUAGUUACAUCUCCUCGAGAUUCAAAGACGGUUAUUACAUAAUAACCGUCUUUGAAUGUUACAUCUGAUCGACAUUCAAAAACAGUUAUUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775607.1
ncRNA:24   GGAGCUCUAAGUUUCUGCCAAUAA   1
  ***|*|*|||||||||||||||||
targets:1538   AAGCAACAUUCAAAGACGGUUAUU   1561

1.0 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:24   GGAGCUCUAAGUUUCUGCCAAUAA   1
  *|*=*|*||||||||=||||||||
targets:1593   ACAUAACAUUCAAAGGCGGUUAUU   1616

2.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget