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BaseInfo

ncRNA ID novel_gma_miR9164
Species Glycine max
Class miRNA
Genome position Chr18:39286711-39286766 [-]
Reference genome Glycine_max_v2.0
Source SRR1451622
Length 24
Mature sequence(if miRNA) 33 - AUUGGUGGAUUCUACGACGGGCCU - 56
Stem-loop(if miRNA) --A UG  G             --    G
   U  GU GAUUCUACGACGG  GCCU C
   |  || |||||||||||||  ||||
   A  CG UUGAGAUGCUGCU  UGGA C
UUA GU  G             AG    U
Stem-loop sequence AUUGGUGGAUUCUACGACGGGCCUGCCUAGGUGAUCGUCGUAGAGUUGGCUGAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771273.1
ncRNA:24   UCCGGGCAGCAUCUUAGGUGGUUA   1
  ||||||||||||||||||||||||
targets:3227   AGGCCCGUCGUAGAAUCCACCAAU   3250

0.0 PREDICTED: Glycine max probable transmembrane GTPase FZO-like, chloroplastic (LOC102661240), transcript variant X1, mRNA probable transmembrane GTPase FZO-like, chloroplastic(LOC102661240) coding protein psRNATarget
XM_014771274.1
ncRNA:24   UCCGGGCAGCAUCUUAGGUGGUUA   1
  ||||||||||||||||||||||||
targets:3601   AGGCCCGUCGUAGAAUCCACCAAU   3624

0.0 PREDICTED: Glycine max probable transmembrane GTPase FZO-like, chloroplastic (LOC102661240), transcript variant X2, mRNA probable transmembrane GTPase FZO-like, chloroplastic(LOC102661240) coding protein psRNATarget