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BaseInfo

ncRNA ID novel_gma_miR9157
Species Glycine max
Class miRNA
Genome position Chr13:43565483-43565621 [-]
Reference genome Glycine_max_v2.0
Source SRR1451622
Length 19
Mature sequence(if miRNA) 1 - GUGUUGUAGAAGGAAGAGA - 19
Stem-loop(if miRNA) --UAA          C   AUC UUCUUCAUUUUUGGCUUUACAAAACUACCGUGUCUGGUAAAGGGUUC
     UCUUUCUACA CAC   G                                               G
     |||||||||| |||   |                                               U
     AGGAAGAUGU GUG   U                                               U
AGAGA          U   --A UUUUGAACCAGAAGAAAAUCGAUUGUUGAAAAAAGUGACCUUUACAA
Stem-loop sequence UAAUCUUUCUACACCACAUCGUUCUUCAUUUUUGGCUUUACAAAACUACCGUGUCUGGUAAAGGGUUCGUUAACAUUUCCAGUGAAAAAAGUUGUUAGCUAAAAGAAGACCAAGUUUUUAGUGUUGUAGAAGGAAGAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003553215.3
ncRNA:19   AGAGAAGGAAGAUGUUGUG   1
  ||||||||||||||||*|*
targets:237   UCUCUUCCUUCUACAAGAG   255

2.5 PREDICTED: Glycine max protein NUCLEAR FUSION DEFECTIVE 4-like (LOC100796700), transcript variant X1, mRNA protein NUCLEAR FUSION DEFECTIVE 4-like(LOC100796700) coding protein psRNATarget
XM_006597992.2
ncRNA:19   AGAGAAGGAAGAUGUUGUG   1
  |||*||||||||||||*||
targets:1385   UCUGUUCCUUCUACAAAAC   1403

2.5 PREDICTED: Glycine max protein ZINC INDUCED FACILITATOR-LIKE 1-like (LOC100815467), transcript variant X1, mRNA protein ZINC INDUCED FACILITATOR-LIKE 1-like(LOC100815467) coding protein psRNATarget
XM_014768269.1
ncRNA:19   AGAGAAGGAAGAUGUUGUG   1
  |||*||||||||||||*||
targets:1063   UCUGUUCCUUCUACAAAAC   1081

2.5 PREDICTED: Glycine max protein ZINC INDUCED FACILITATOR-LIKE 1-like (LOC100815467), transcript variant X2, mRNA protein ZINC INDUCED FACILITATOR-LIKE 1-like(LOC100815467) coding protein psRNATarget