ncRNA ID | novel_gma_miR9157 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr13:43565483-43565621 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451622 |
Length | 19 |
Mature sequence(if miRNA) | 1 - GUGUUGUAGAAGGAAGAGA - 19 |
Stem-loop(if miRNA) |
--UAA          C   AUC UUCUUCAUUUUUGGCUUUACAAAACUACCGUGUCUGGUAAAGGGUUC      UCUUUCUACA CAC   G                                               G      |||||||||| |||   |                                               U      AGGAAGAUGU GUG   U                                               U AGAGA          U   --A UUUUGAACCAGAAGAAAAUCGAUUGUUGAAAAAAGUGACCUUUACAA |
Stem-loop sequence | UAAUCUUUCUACACCACAUCGUUCUUCAUUUUUGGCUUUACAAAACUACCGUGUCUGGUAAAGGGUUCGUUAACAUUUCCAGUGAAAAAAGUUGUUAGCUAAAAGAAGACCAAGUUUUUAGUGUUGUAGAAGGAAGAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003553215.3 |
|
2.5 | PREDICTED: Glycine max protein NUCLEAR FUSION DEFECTIVE 4-like (LOC100796700), transcript variant X1, mRNA | protein NUCLEAR FUSION DEFECTIVE 4-like(LOC100796700) | coding protein | psRNATarget | |||||||||
XM_006597992.2 |
|
2.5 | PREDICTED: Glycine max protein ZINC INDUCED FACILITATOR-LIKE 1-like (LOC100815467), transcript variant X1, mRNA | protein ZINC INDUCED FACILITATOR-LIKE 1-like(LOC100815467) | coding protein | psRNATarget | |||||||||
XM_014768269.1 |
|
2.5 | PREDICTED: Glycine max protein ZINC INDUCED FACILITATOR-LIKE 1-like (LOC100815467), transcript variant X2, mRNA | protein ZINC INDUCED FACILITATOR-LIKE 1-like(LOC100815467) | coding protein | psRNATarget |