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BaseInfo

ncRNA ID novel_gma_miR9155
Species Glycine max
Class miRNA
Genome position Chr19:1893120-1893190 [-]
Reference genome Glycine_max_v2.0
Source SRR1294477
Length 24
Mature sequence(if miRNA) 1 - AAUCAACUUGAUCCGUAGAAGCCU - 24
Stem-loop(if miRNA) --U                    C      CGCUU
   CUUUUACGGAUCAAGUUGAU CGUAUG     A
   |||||||||||||||||||| ||||||     A
   GAAGAUGCCUAGUUCAACUA GCAUAC     U
UCC                    A      AACUA
Stem-loop sequence UCUUUUACGGAUCAAGUUGAUCCGUAUGCGCUUAAUAUCAACAUACGAAUCAACUUGAUCCGUAGAAGCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003547498.3
ncRNA:24   UCCGAAGAUGCCUAGUUCAACUAA   1
  |**|||||=||||||||||||||*
targets:45   AUUCUUCUGCGGAUCAAGUUGAUC   68

2.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_014768353.1
ncRNA:24   UCCGAAGAUGCCUAGUUCAACUAA   1
  |**|||||=||||||||||||||*
targets:640   AUUCUUCUGCGGAUCAAGUUGAUC   663

2.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_006593444.2
ncRNA:24   UCCGAAGAUGCCUAGUUCAACUAA   1
  *******|||||||||||||||||
targets:3670   UAAAGCAUACGGAUCAAGUUGAUU   3693

2.0 PREDICTED: Glycine max calcium-transporting ATPase 8, plasma membrane-type-like (LOC100813841), transcript variant X11, mRNA calcium-transporting ATPase 8, plasma membrane-type-like(LOC100813841) coding protein psRNATarget
XM_014768353.1
ncRNA:24   UCCGAAGAUGCCUAGUUCAACUAA   1
  |*****=||||||||||||||||*
targets:588   AAAGAAUUACGGAUCAAGUUGAUC   611

3.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_006600975.2
ncRNA:24   UCCGAAGAUGCCUAGUUCAACUAA   1
  |||=|**||||||||||||||||*
targets:1181   AGGUUGAUACGGAUCAAGUUGAUC   1204

3.0 PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA basic leucine zipper 9-like(LOC100776831) coding protein psRNATarget