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BaseInfo

ncRNA ID novel_gma_miR9142
Species Glycine max
Class miRNA
Genome position Chr14:25038857-25038915 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 36 - CAAAGGUACUUAUCGAUAAUGGAU - 59
Stem-loop(if miRNA) --A   G          -  G A  -   CA
   CAU UGUCGGUGAG AU U UG GAC  C
   ||| |||||||||| || | || |||
   GUA AUAGCUAUUC UG A AC CUG  G
UAG   -          A  G A  G   UU
Stem-loop sequence ACAUGUGUCGGUGAGAUGUAUGGACCACGUUGUCGCAAAGGUACUUAUCGAUAAUGGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006573263.2
ncRNA:24   UAGGUAAUAGCUAUUCAUGGAAAC   1
  *|=||||=|=||||||||||||||
targets:100   CUUCAUUGUUGAUAAGUACCUUUG   123

2.0 PREDICTED: Glycine max uncharacterized LOC102667180 (LOC102667180), mRNA uncharacterized LOC102667180(LOC102667180) coding protein psRNATarget
XM_014779032.1
ncRNA:24   UAGGUAAUAGCUAUUCAUGGAAAC   1
  ||*=-|||||*=||||||||||||
targets:2009   AUGU-UUAUCUGUAAGUACCUUUG   2031

2.5 PREDICTED: Glycine max release factor glutamine methyltransferase-like (LOC100798586), transcript variant X2, mRNA release factor glutamine methyltransferase-like(LOC100798586) coding protein psRNATarget
XM_014779031.1
ncRNA:24   UAGGUAAUAGCUAUUCAUGGAAAC   1
  ||*=-|||||*=||||||||||||
targets:2012   AUGU-UUAUCUGUAAGUACCUUUG   2034

2.5 PREDICTED: Glycine max release factor glutamine methyltransferase-like (LOC100798586), transcript variant X1, mRNA release factor glutamine methyltransferase-like(LOC100798586) coding protein psRNATarget