ncRNA ID | novel_gma_miR9138 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:3341951-3342158 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUGACCGUUAGCAAGUGAUGU - 21 |
Stem-loop(if miRNA) |
--                      A   A  A           A                A    A      A          AUGUCA  -  CAUGAAAGAUGGA   UUGACCGUUAGCAAGUGAUGUU ACU CC CGUGUCACGUU UUAUUGGAUGACACCU CCAC UGUCAU UUCUGAUUGG      AU UC             A   |||||||||||||||||||||| ||| || ||||||||||| |||||||||||||||| |||| |||||| ||||||||||      || ||   AACUGGCAAUCGUUCACUACAA UGA GG GCACAGUGCAA AAUAACCUACUGUGGA GGUG ACAGUA AAGACUAACC      GU AC             U GC                      C   C  A           G                C    C      C          -----A  U  UUUUGUUGUUACG |
Stem-loop sequence | UUGACCGUUAGCAAGUGAUGUUAACUACCACGUGUCACGUUAUUAUUGGAUGACACCUACCACAUGUCAUAUUCUGAUUGGAUGUCAAUUCCAUGAAAGAUGGAAUGCAUUGUUGUUUUCAUUGACCAAUCAGAACAUGACACGUGGCAGGUGUCAUCCAAUAAGAACGUGACACGAGGCAGUCAACAUCACUUGCUAACGGUCAACG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006602607.2 |
|
0.0 | PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA | transcription factor TGA7-like(LOC100794752) | coding protein | psRNATarget |