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BaseInfo

ncRNA ID novel_gma_miR9138
Species Glycine max
Class miRNA
Genome position Chr14:3341951-3342158 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 21
Mature sequence(if miRNA) 1 - UUGACCGUUAGCAAGUGAUGU - 21
Stem-loop(if miRNA) --                      A   A  A           A                A    A      A          AUGUCA  -  CAUGAAAGAUGGA
  UUGACCGUUAGCAAGUGAUGUU ACU CC CGUGUCACGUU UUAUUGGAUGACACCU CCAC UGUCAU UUCUGAUUGG      AU UC             A
  |||||||||||||||||||||| ||| || ||||||||||| |||||||||||||||| |||| |||||| ||||||||||      || ||
  AACUGGCAAUCGUUCACUACAA UGA GG GCACAGUGCAA AAUAACCUACUGUGGA GGUG ACAGUA AAGACUAACC      GU AC             U
GC                      C   C  A           G                C    C      C          -----A  U  UUUUGUUGUUACG
Stem-loop sequence UUGACCGUUAGCAAGUGAUGUUAACUACCACGUGUCACGUUAUUAUUGGAUGACACCUACCACAUGUCAUAUUCUGAUUGGAUGUCAAUUCCAUGAAAGAUGGAAUGCAUUGUUGUUUUCAUUGACCAAUCAGAACAUGACACGUGGCAGGUGUCAUCCAAUAAGAACGUGACACGAGGCAGUCAACAUCACUUGCUAACGGUCAACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006602607.2
ncRNA:21   UGUAGUGAACGAUUGCCAGUU   1
  |||||||||||||||||||||
targets:696   ACAUCACUUGCUAACGGUCAA   716

0.0 PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA transcription factor TGA7-like(LOC100794752) coding protein psRNATarget