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BaseInfo

ncRNA ID novel_gma_miR9134
Species Glycine max
Class miRNA
Genome position Chr14:14718371-14718427 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 21
Mature sequence(if miRNA) 1 - UCAACUUGAUCCGUAUGAGUC - 21
Stem-loop(if miRNA) --    C          UG   CA    A
  UCAA UUGAUCCGUA  AGU  UACG A
  |||| ||||||||||  |||  |||| U
  AGUU AACUAGGCAU  UCA  AUGU C
CU    C          --   CA    A
Stem-loop sequence UCAACUUGAUCCGUAUGAGUCAUACGAAUCAUGUAACACUUACGGAUCAACUUGAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006600975.2
ncRNA:21   CUGAGUAUGCCUAGUUCAACU   1
  |==|*||||||||||||||||
targets:1182   GGUUGAUACGGAUCAAGUUGA   1202

2.0 PREDICTED: Glycine max basic leucine zipper 9-like (LOC100776831), mRNA basic leucine zipper 9-like(LOC100776831) coding protein psRNATarget
XM_006593444.2
ncRNA:21   CUGAGUAUGCCUAGUUCAACU   1
  *|**|||||||||||||||||
targets:3671   AAAGCAUACGGAUCAAGUUGA   3691

2.0 PREDICTED: Glycine max calcium-transporting ATPase 8, plasma membrane-type-like (LOC100813841), transcript variant X11, mRNA calcium-transporting ATPase 8, plasma membrane-type-like(LOC100813841) coding protein psRNATarget
XM_014768353.1
ncRNA:21   CUGAGUAUGCCUAGUUCAACU   1
  **||=*|=|||||||||||||
targets:641   UUCUUCUGCGGAUCAAGUUGA   661

3.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_003547498.3
ncRNA:21   CUGAGUAUGCCUAGUUCAACU   1
  **||=*|=|||||||||||||
targets:46   UUCUUCUGCGGAUCAAGUUGA   66

3.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget