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BaseInfo

ncRNA ID novel_gma_miR9131
Species Glycine max
Class miRNA
Genome position Chr13:4828942-4829069 [-]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 22
Mature sequence(if miRNA) 107 - AAUGUAGACUUAUGUACUAGGA - 128
Stem-loop(if miRNA) --  UG      UAU      G  --AC   CAGUAAAAUUUUCGAGUCGAUCCAACGGUGAACAA
  AA  UAGACU   GUACUA GA    CUC                                   A
  ||  ||||||   |||||| ||    |||
  UU  GUUUGG   UAUGGU UU    AGA                                   U
UU  GU      --U      G  GAAA   AUGAGUUUAUGGGGUCAUUGUAAGGGAAGAAAGGU
Stem-loop sequence AAUGUAGACUUAUGUACUAGGAACCUCCAGUAAAAUUUUCGAGUCGAUCCAACGGUGAACAAAUUGGAAAGAAGGGAAUGUUACUGGGGUAUUUGAGUAAGAAAAGUUGUGGUAUUGGUUUGUGUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003518173.3
ncRNA:22   AGGAUCAUGUAUUCAGAUGUAA   1
  ***||||||||||||=|||||*
targets:2921   GAAUAGUACAUAAGUUUACAUG   2942

2.5 PREDICTED: Glycine max transmembrane 9 superfamily member 9-like (LOC100788226), mRNA transmembrane 9 superfamily member 9-like(LOC100788226) coding protein psRNATarget