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BaseInfo

ncRNA ID novel_gma_miR9125
Species Glycine max
Class miRNA
Genome position Chr1:4718993-4719044 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 1 - UUUCAUGUGAAUUAUAGUUGGUCC - 24
Stem-loop(if miRNA) --U   A   -           GG  C
   UUC UGU GAAUUAUAGUU  UC A
   ||| ||| |||||||||||  ||
   AAG ACA UUUAGUAUUAG  AG A
UUU   -   A           AA  A
Stem-loop sequence UUUCAUGUGAAUUAUAGUUGGUCCAAAGAAAGAUUAUGAUUUAACAGAAUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006586025.2
ncRNA:24   CCUGGUUGAUAUUAAGUGUACUUU   1
  |*|*|||=|||||*||||||||||
targets:3210   GAAGCAAUUAUAAAUCACAUGAAA   3233

2.5 PREDICTED: Glycine max uncharacterized LOC100799986 (LOC100799986), transcript variant X2, mRNA uncharacterized LOC100799986(LOC100799986) coding protein psRNATarget
XM_006586024.2
ncRNA:24   CCUGGUUGAUAUUAAGUGUACUUU   1
  |*|*|||=|||||*||||||||||
targets:3305   GAAGCAAUUAUAAAUCACAUGAAA   3328

2.5 PREDICTED: Glycine max uncharacterized LOC100799986 (LOC100799986), transcript variant X1, mRNA uncharacterized LOC100799986(LOC100799986) coding protein psRNATarget