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BaseInfo

ncRNA ID novel_gma_miR9118
Species Glycine max
Class miRNA
Genome position Chr13:39345341-39345388 [-]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 21
Mature sequence(if miRNA) 28 - UUGGGUUGUCAUGUUAGGACC - 48
Stem-loop(if miRNA) ---UUG   U       U   A  U
      GGU GUCAUGU AGG CC A
      ||| ||||||| ||| ||
      UCG UAGUACG UUU GG G
UUGAUG   -       U   A  G
Stem-loop sequence UUGGGUUGUCAUGUUAGGACCUAGGGGAUUUUGCAUGAUGCUGUAGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001255612.2
ncRNA:21   CCAGGAUUGUACUGUUGGGUU   1
  **|||*||||||||||=||||
targets:556   AAUCCAAACAUGACAAUCCAA   576

2.5 Glycine max GDSL esterase/lipase At5g03610-like (LOC100800932), mRNA GDSL esterase/lipase At5g03610-like(LOC100800932) coding protein psRNATarget
BT096177.1
ncRNA:21   CCAGGAUUGUACUGUUGGGUU   1
  **|||*||||||||||=||||
targets:558   AAUCCAAACAUGACAAUCCAA   578

2.5 Soybean clone JCVI-FLGm-20B11 unknown mRNA NA coding protein psRNATarget