ncRNA ID | novel_gma_miR9113 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr13:36507239-36507383 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UACUUUGAAUUUUGUGCUUUG - 21 |
Stem-loop(if miRNA) |
--UAC    A                    C           UGA   U  ---------G     --A   GC   A      UUUG AUUUUGUGCUUUGAUUCACA CACCUUACAAA   AUA GG          CAAAG   GAU  UGC A      |||| |||||||||||||||||||| |||||||||||   ||| ||          |||||   |||  |||      AAAC UAAAACACGAAACUAAGUGU GUGGAAUGUUU   UGU CC          GUUUC   UUG  AUG U UGAUA    C                    C           UAA   U  ACCACACUUA     GUG   AA   U |
Stem-loop sequence | UACUUUGAAUUUUGUGCUUUGAUUCACACCACCUUACAAAUGAAUAUGGGCAAAGAGAUGCUGCAAUUGUAAAGUUGUGCUUUGAUUCACACCACCUUGUAAUUUUGUAAGGUGCUGUGAAUCAAAGCACAAAAUCCAAAAUAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006580588.2 |
|
3.0 | PREDICTED: Glycine max protein ROOT INITIATION DEFECTIVE 3-like (LOC102662801), mRNA | protein ROOT INITIATION DEFECTIVE 3-like(LOC102662801) | coding protein | psRNATarget |