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BaseInfo

ncRNA ID novel_gma_miR9113
Species Glycine max
Class miRNA
Genome position Chr13:36507239-36507383 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 21
Mature sequence(if miRNA) 1 - UACUUUGAAUUUUGUGCUUUG - 21
Stem-loop(if miRNA) --UAC    A                    C           UGA   U  ---------G     --A   GC   A
     UUUG AUUUUGUGCUUUGAUUCACA CACCUUACAAA   AUA GG          CAAAG   GAU  UGC A
     |||| |||||||||||||||||||| |||||||||||   ||| ||          |||||   |||  |||
     AAAC UAAAACACGAAACUAAGUGU GUGGAAUGUUU   UGU CC          GUUUC   UUG  AUG U
UGAUA    C                    C           UAA   U  ACCACACUUA     GUG   AA   U
Stem-loop sequence UACUUUGAAUUUUGUGCUUUGAUUCACACCACCUUACAAAUGAAUAUGGGCAAAGAGAUGCUGCAAUUGUAAAGUUGUGCUUUGAUUCACACCACCUUGUAAUUUUGUAAGGUGCUGUGAAUCAAAGCACAAAAUCCAAAAUAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006580588.2
ncRNA:21   GUUUCGUGUUUUAAGUUUCAU   1
  *||||=*|||||||||||||*
targets:1226   AAAAGUUCAAAAUUCAAAGUC   1246

3.0 PREDICTED: Glycine max protein ROOT INITIATION DEFECTIVE 3-like (LOC102662801), mRNA protein ROOT INITIATION DEFECTIVE 3-like(LOC102662801) coding protein psRNATarget