ncRNA ID | novel_gma_miR9111 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr13:29693263-29693470 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 24 |
Mature sequence(if miRNA) | 185 - UAAAAAACCGAUGUUGUAAGUGAC - 208 |
Stem-loop(if miRNA) |
-G  AUU    --                          UA GUGACAUUUAACAUCGGUUUUUUAAAAAACUGAUGUUGUAAGUAACAUUUAACAUCGGUUUUUUA   AC   UAAC  AUCGGUUUUUUAAAAAACCGAUGUUG  G                                                                 A   ||   ||||  ||||||||||||||||||||||||||  |   GU   GAAU  UGUAGCCAAAAAAUUUUUUGGCUACA  A                                                                 A CA  ---    GU                          -- UUUACAGUGAAUGUUGUAGCCAAUAAAUUUUUUGGCUACAAUUUACAGUGAAUGUUGUAGUCAAA |
Stem-loop sequence | GACAUUUAACAUCGGUUUUUUAAAAAACCGAUGUUGUAGGUGACAUUUAACAUCGGUUUUUUAAAAAACUGAUGUUGUAAGUAACAUUUAACAUCGGUUUUUUAAAAAACUGAUGUUGUAAGUGACAUUUAACAUCGGUUUUUUAAAUAACCGAUGUUGUAAGUGACAUUUAACAUCGGUUUUUUAAAAAACCGAUGUUGUAAGUGAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006601416.2 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC102666752 (LOC102666752), transcript variant X1, mRNA | uncharacterized LOC102666752(LOC102666752) | coding protein | psRNATarget |