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BaseInfo

ncRNA ID novel_gma_miR9111
Species Glycine max
Class miRNA
Genome position Chr13:29693263-29693470 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 185 - UAAAAAACCGAUGUUGUAAGUGAC - 208
Stem-loop(if miRNA) -G  AUU    --                          UA GUGACAUUUAACAUCGGUUUUUUAAAAAACUGAUGUUGUAAGUAACAUUUAACAUCGGUUUUUUA
  AC   UAAC  AUCGGUUUUUUAAAAAACCGAUGUUG  G                                                                 A
  ||   ||||  ||||||||||||||||||||||||||  |
  GU   GAAU  UGUAGCCAAAAAAUUUUUUGGCUACA  A                                                                 A
CA  ---    GU                          -- UUUACAGUGAAUGUUGUAGCCAAUAAAUUUUUUGGCUACAAUUUACAGUGAAUGUUGUAGUCAAA
Stem-loop sequence GACAUUUAACAUCGGUUUUUUAAAAAACCGAUGUUGUAGGUGACAUUUAACAUCGGUUUUUUAAAAAACUGAUGUUGUAAGUAACAUUUAACAUCGGUUUUUUAAAAAACUGAUGUUGUAAGUGACAUUUAACAUCGGUUUUUUAAAUAACCGAUGUUGUAAGUGACAUUUAACAUCGGUUUUUUAAAAAACCGAUGUUGUAAGUGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006601416.2
ncRNA:24   CAGUGAAU-GUUGUAGCCAAAAAAU   1
  ***==|||-|||||||||||||||*
targets:417   UAAGUUUAUCAACAUCGGUUUUUUC   441

3.0 PREDICTED: Glycine max uncharacterized LOC102666752 (LOC102666752), transcript variant X1, mRNA uncharacterized LOC102666752(LOC102666752) coding protein psRNATarget