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BaseInfo

ncRNA ID	novel_gma_miR9110
Species	Glycine max
Class	miRNA
Genome position	Chr13:26903837-26903925 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451621
Length	21
Mature sequence(if miRNA)	1 - AGAAUUACGGAUCAAGUUGAU - 21
Stem-loop(if miRNA)	--                      C   AU  GC         A   AGAAUUACGGAUCAAGUUGAUC GCA  AG  UUACGGAUC A   |||||||||||||||||||||| |||  ||  ||||||||| C   UCUUAAUGUCUAGUUCAAUUAG CGU  UC  AAUGCCUAG U CU                      A   CU  UA         U
Stem-loop sequence	AGAAUUACGGAUCAAGUUGAUCCGCAAUAGGCUUACGGAUCAACUUGAUCCGUAAAUCUUCUGCAGAUUAACUUGAUCUGUAAUUCUUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003547498.3	ncRNA:21   UAGUUGAACUAGGCAUUAAGA   1   ||=|||||||||||||||||| targets:29   AUUAACUUGAUCCGUAAUUCU   49 Target Full Sequence	1.0	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_014768353.1	ncRNA:21   UAGUUGAACUAGGCAUUAAGA   1   ||=|||||||||||||||||| targets:624   AUUAACUUGAUCCGUAAUUCU   644 Target Full Sequence	1.0	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_003547498.3	ncRNA:21   UAGUUGAACUAGGCAUUAAGA   1   |||||||||||||||||*||| targets:462   AUCAACUUGAUCCGUAAGUCU   482 Target Full Sequence	1.5	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_014768353.1	ncRNA:21   UAGUUGAACUAGGCAUUAAGA   1   |||||||||||||||||*||| targets:1057   AUCAACUUGAUCCGUAAGUCU   1077 Target Full Sequence	1.5	PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA	CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524)	coding protein	psRNATarget
XM_006585358.2	ncRNA:21   UAGUUGAACUAGGCAUUAAGA   1   *|||||*||*||||||||||| targets:1593   CUCAACAUGCUCCGUAAUUCU   1613 Target Full Sequence	2.5	PREDICTED: Glycine max high affinity sulfate transporter 2-like (LOC100815818), transcript variant X4, mRNA	high affinity sulfate transporter 2-like(LOC100815818)	coding protein	psRNATarget
XM_006585356.2	ncRNA:21   UAGUUGAACUAGGCAUUAAGA   1   *|||||*||*||||||||||| targets:1659   CUCAACAUGCUCCGUAAUUCU   1679 Target Full Sequence	2.5	PREDICTED: Glycine max high affinity sulfate transporter 2-like (LOC100815818), transcript variant X2, mRNA	high affinity sulfate transporter 2-like(LOC100815818)	coding protein	psRNATarget
XM_006585357.2	ncRNA:21   UAGUUGAACUAGGCAUUAAGA   1   *|||||*||*||||||||||| targets:1806   CUCAACAUGCUCCGUAAUUCU   1826 Target Full Sequence	2.5	PREDICTED: Glycine max high affinity sulfate transporter 2-like (LOC100815818), transcript variant X3, mRNA	high affinity sulfate transporter 2-like(LOC100815818)	coding protein	psRNATarget
XM_006585355.2	ncRNA:21   UAGUUGAACUAGGCAUUAAGA   1   *|||||*||*||||||||||| targets:1857   CUCAACAUGCUCCGUAAUUCU   1877 Target Full Sequence	2.5	PREDICTED: Glycine max high affinity sulfate transporter 2-like (LOC100815818), transcript variant X1, mRNA	high affinity sulfate transporter 2-like(LOC100815818)	coding protein	psRNATarget