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BaseInfo

ncRNA ID novel_gma_miR9109
Species Glycine max
Class miRNA
Genome position Chr13:23382272-23382330 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 36 - AUAUGACCCAUACGAAUUACUGAU - 59
Stem-loop(if miRNA) --  A    C A           C    C
  CG UGAU C UAUGGGUCAUA GGAU A
  || |||| | ||||||||||| |||| U
  GU AUUA G AUACCCAGUAU CCUA C
UA  C    A C           A    A
Stem-loop sequence CGAUGAUCCAUAUGGGUCAUACGGAUCAUCAAUCCAUAUGACCCAUACGAAUUACUGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003532177.3
ncRNA:24   UAGUCAUUAAGCAUACCCAGUAUA   1
  |**||*|||||*||||||||||||
targets:908   AAGAGGAAUUCUUAUGGGUCAUAU   931

2.5 PREDICTED: Glycine max nucleolar GTP-binding protein 1 (LOC100794359), transcript variant X2, mRNA nucleolar GTP-binding protein 1(LOC100794359) coding protein psRNATarget
XM_014779471.1
ncRNA:24   UAGUCAUUAAGCAUACCCAGUAUA   1
  |**||*|||||*||||||||||||
targets:932   AAGAGGAAUUCUUAUGGGUCAUAU   955

2.5 PREDICTED: Glycine max nucleolar GTP-binding protein 1 (LOC100794359), transcript variant X1, mRNA nucleolar GTP-binding protein 1(LOC100794359) coding protein psRNATarget