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BaseInfo

ncRNA ID novel_gma_miR9103
Species Glycine max
Class miRNA
Genome position Chr1:37117157-37117294 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 115 - ACCGAUGUUAACUGUAUAUAUUCA - 138
Stem-loop(if miRNA) --                          AUU  A               A  CA        A     C
  AAUGUAUACAGUUGACAUCGGUUUUU   CA AACUGAUGUUAACGU UA  UUAACAUC GUUUU U
  ||||||||||||||||||||||||||   || ||||||||||||||| ||  |||||||| ||||| A
  UUAUAUAUGUCAAUUGUAGCCAAAAA   GU UUGGCUACAAUUGCA AU  AAUUGUAG UAAAA U
AC                          -AU  C               G  AC        C     A
Stem-loop sequence AAUGUAUACAGUUGACAUCGGUUUUUAUUCAAAACUGAUGUUAACGUAUACAUUAACAUCAGUUUUCUAUAAAAAUCGAUGUUAACAUAGACGUUAACAUCGGUUCUGUAAAAAACCGAUGUUAACUGUAUAUAUUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006592792.2
ncRNA:24   ACUUAUAUAUGUCAAUUGUAGCCA   1
  |*|=*|*|||||||||||=|||||
targets:5   UAAGGAGAUACAGUUAACGUCGGU   28

2.5 PREDICTED: Glycine max receptor-like protein kinase HSL1 (LOC100778128), mRNA receptor-like protein kinase HSL1(LOC100778128) coding protein psRNATarget