ncRNA ID | novel_gma_miR9097 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr12:9054756-9054908 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CCGUCUUUGAUUGUUACAUCUGGU - 24 |
Stem-loop(if miRNA) |
--                       U            GUCAAUUUUUAC    C             ------        CCGUCUUUGAUUGUUACAUCUGG UCAGCAUUCAAA            AUAA AACCGUCUUUGAA      GUUUGA   ||||||||||||||||||||||| ||||||||||||            |||| |||||||||||||      |||||A   GGCAGAAACUAACAAUGUAGACC AGUUGUAAGUUU            UAUU UUGGUAGAAACUU      CAGACU UU                       U            AUGCCAAUAAAC    A             ACGUCA      |
Stem-loop sequence | CCGUCUUUGAUUGUUACAUCUGGUUCAGCAUUCAAAGUCAAUUUUUACAUAACAACCGUCUUUGAAGUUUGAAUCAGACACUGCAUUCAAAGAUGGUUAUUAUCAAAUAACCGUAUUUGAAUGUUGAUCCAGAUGUAACAAUCAAAGACGGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003527973.3 |
|
2.5 | PREDICTED: Glycine max glucose-1-phosphate adenylyltransferase large subunit 1 (LOC100789920), transcript variant X1, mRNA | glucose-1-phosphate adenylyltransferase large subunit 1(LOC100789920) | coding protein | psRNATarget |