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BaseInfo

ncRNA ID novel_gma_miR9097
Species Glycine max
Class miRNA
Genome position Chr12:9054756-9054908 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 1 - CCGUCUUUGAUUGUUACAUCUGGU - 24
Stem-loop(if miRNA) --                       U            GUCAAUUUUUAC    C             ------     
  CCGUCUUUGAUUGUUACAUCUGG UCAGCAUUCAAA            AUAA AACCGUCUUUGAA      GUUUGA
  ||||||||||||||||||||||| ||||||||||||            |||| |||||||||||||      |||||A
  GGCAGAAACUAACAAUGUAGACC AGUUGUAAGUUU            UAUU UUGGUAGAAACUU      CAGACU
UU                       U            AUGCCAAUAAAC    A             ACGUCA     
Stem-loop sequence CCGUCUUUGAUUGUUACAUCUGGUUCAGCAUUCAAAGUCAAUUUUUACAUAACAACCGUCUUUGAAGUUUGAAUCAGACACUGCAUUCAAAGAUGGUUAUUAUCAAAUAACCGUAUUUGAAUGUUGAUCCAGAUGUAACAAUCAAAGACGGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003527973.3
ncRNA:24   UGGUCUACAUUGUUAGUUUCUGCC   1
  |**|*|||*||||||||||||=||
targets:1971   AAAAAAUGCAACAAUCAAAGAUGG   1994

2.5 PREDICTED: Glycine max glucose-1-phosphate adenylyltransferase large subunit 1 (LOC100789920), transcript variant X1, mRNA glucose-1-phosphate adenylyltransferase large subunit 1(LOC100789920) coding protein psRNATarget