Search result

BaseInfo

ncRNA ID novel_gma_miR9096
Species Glycine max
Class miRNA
Genome position Chr12:5584717-5584785 [-]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 46 - AUGAAAUUGUGUUUCCGGUGUGUU - 69
Stem-loop(if miRNA) --       UG     C  G     U    AAUCC
  AUGAAAU  UGUUU CG UGUGU AAUU     C
  |||||||  ||||| || ||||| ||||
  UACUUUA  ACAAA GU ACACG UUAA     A
GU       GU     A  A     -    CCCCC
Stem-loop sequence AUGAAAUUGUGUUUCCGGUGUGUUAAUUAAUCCCACCCCCAAUUGCACAAUGAAAACAUGAUUUCAUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003556192.3
ncRNA:24   UUGUGUGGCCUUUGUGUUAAAGUA   1
  *|||=|**||||||||||||||||
targets:474   CACAUAAAGGAAACACAAUUUCAU   497

2.0 PREDICTED: Glycine max DNL-type zinc finger protein-like (LOC100819850), mRNA DNL-type zinc finger protein-like(LOC100819850) coding protein psRNATarget