Search result

BaseInfo

ncRNA ID novel_gma_miR9093
Species Glycine max
Class miRNA
Genome position Chr12:10877712-10877786 [-]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 52 - UUCGGAGAAGCUACUGAAAGAAGG - 75
Stem-loop(if miRNA) --                A     GG UC     AAAA
  UUCGGAGAAGCUACUG AAGAA  U  UUCCG    A
  |||||||||||||||| |||||  |  |||||
  AAGCCUCUUCGAUGGC UUCUU  A  AAGGC    U
GA                C     GA -C     CAUC
Stem-loop sequence UUCGGAGAAGCUACUGAAAGAAGGUUCUUCCGAAAAAUCUACCGGAACAAGUUCUUCCGGUAGCUUCUCCGAAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT095979.1
ncRNA:24   GGAAGAAAGUCAUCGAAGAGGCUU   1
  ==||*|||||*|||=|||||||||
targets:202   UUUUGUUUCAUUAGUUUCUCCGAA   225

2.5 Soybean clone JCVI-FLGm-20M15 unknown mRNA NA coding protein psRNATarget
XM_003544726.3
ncRNA:24   GGAAGAAAGUCAUCGAAGAGGCUU   1
  ==||*|||||*|||=|||||||||
targets:299   UUUUGUUUCAUUAGUUUCUCCGAA   322

2.5 PREDICTED: Glycine max ethylene-responsive transcription factor 3 (LOC100820249), mRNA ethylene-responsive transcription factor 3(LOC100820249) coding protein psRNATarget