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BaseInfo

ncRNA ID	novel_gma_miR9090
Species	Glycine max
Class	miRNA
Genome position	Chr12:17224406-17224566 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451621
Length	22
Mature sequence(if miRNA)	140 - UUAAUGAAUGAACGAUUGUAUU - 161
Stem-loop(if miRNA)	--              AU  -               A         C       A     UAAAAAAAUCGAUGUUAACGUG   UUAAUGAAUGAACG  UG UAUUUUUGUAAAUAA UUAAUUUUG UAACAUC AUUUU                      A   ||||||||||||||  || ||||||||||||||| ||||||||| ||||||| |||||                      C   AAUUACUUACUUGU  AC GUAAAAACAUUUAUU AAUUAAAAC AAUUGUA ACCAA                      G AC              -C  U               C         -       -     AAAAUUAUUGGUUACAAUUAUA
Stem-loop sequence	UUAAUGAAUGAACGAUUGUAUUUUUGUAAAUAAAUUAAUUUUGCUAACAUCAAUUUUUAAAAAAAUCGAUGUUAACGUGACGAUAUUAACAUUGGUUAUUAAAAAACCAAUGUUAACAAAAUUAACUUAUUUACAAAAAUGUCACUGUUCAUUCAUUAACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK244572.1	ncRNA:22   UUAUGUUAGCAAGUAAGUAAUU   1   *=*|||||||||||||||||*| targets:32   UGCACAAUCGUUCAUUCAUUCA   53 Target Full Sequence	1.5	Glycine max cDNA, clone: GMFL01-06-P17	NA	coding protein	psRNATarget
XM_003538999.3	ncRNA:22   UUAUGUUAGCAAGUAAGUAAUU   1   *=*|||||||||||||||||*| targets:63   UGCACAAUCGUUCAUUCAUUCA   84 Target Full Sequence	1.5	PREDICTED: Glycine max phospholipase A1-Ibeta2, chloroplastic-like (LOC100819994), mRNA	phospholipase A1-Ibeta2, chloroplastic-like(LOC100819994)	coding protein	psRNATarget
NM_001317713.2	ncRNA:22   UUAUGUUAGCAAGUAAGUAAUU   1   |*|=||||*||||||||||||| targets:1704   AUUGCAAUGGUUCAUUCAUUAA   1725 Target Full Sequence	2.0	Glycine max transcription factor MYB86-like (LOC100819449), mRNA	transcription factor MYB86-like(LOC100819449)	coding protein	psRNATarget