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BaseInfo

ncRNA ID novel_gma_miR9087
Species Glycine max
Class miRNA
Genome position Chr12:22134842-22134904 [-]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 20
Mature sequence(if miRNA) 44 - UGAGUGUAGGAUUGUUUUCC - 63
Stem-loop(if miRNA) --           UU        U      UA
  UGAGUGUAGGA  GUUUUCCC UUUUGA  U
  |||||||||||  |||||||| ||||||  A
  AUUCAUAUCUU  UAGAAGGG GGGAUU  U
UG           --        U      UA
Stem-loop sequence UGAGUGUAGGAUUGUUUUCCCUUUUUGAUAUAUAUUUAGGGUGGGAAGAUUUCUAUACUUAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006591187.2
ncRNA:20   CCUUUUGUUAGGAUGUGAGU   1
  *|=||||||||||||*||||
targets:3310   CGGAAACAAUCCUACCCUCA   3329

2.5 PREDICTED: Glycine max ubiquitin-activating enzyme E1 1-like (LOC100817492), transcript variant X2, mRNA ubiquitin-activating enzyme E1 1-like(LOC100817492) coding protein psRNATarget
XM_003537257.3
ncRNA:20   CCUUUUGUUAGGAUGUGAGU   1
  *|=||||||||||||*||||
targets:3541   CGGAAACAAUCCUACCCUCA   3560

2.5 PREDICTED: Glycine max ubiquitin-activating enzyme E1 1-like (LOC100817492), transcript variant X1, mRNA ubiquitin-activating enzyme E1 1-like(LOC100817492) coding protein psRNATarget