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BaseInfo

ncRNA ID novel_gma_miR9054
Species Glycine max
Class miRNA
Genome position Chr9:9382346-9382409 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 1 - UUAUUACAUAUAACAUUCUAAGGC - 24
Stem-loop(if miRNA) --UUA    -     A               UU
     UUAC AUAUA CAUUCUAAGGCGGUU  U
     |||| ||||| |||||||||||||||
     AAUG UGUAU GUAAGAUUCCGCCAA  A
CGUAA    C     -               UA
Stem-loop sequence UUAUUACAUAUAACAUUCUAAGGCGGUUUUUAAUAACCGCCUUAGAAUGUAUGUCGUAAAAUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006578723.2
ncRNA:24   CGGAAUCUUACAAUAUACAUUAUU   1
  *|||-||||||||||||||||||*
targets:998   UCCU-AGAAUGUUAUAUGUAAUAU   1020

1.0 PREDICTED: Glycine max ras-related protein RABC1-like (LOC100779729), mRNA ras-related protein RABC1-like(LOC100779729) coding protein psRNATarget
XM_006606335.2
ncRNA:24   CGGAAUCUUACAAUAUACAUUAUU   1
  |==|*|||||||||*||||||||*
targets:1028   GUUUCAGAAUGUUACAUGUAAUAU   1051

2.5 PREDICTED: Glycine max 65-kDa microtubule-associated protein 3-like (LOC100788643), mRNA 65-kDa microtubule-associated protein 3-like(LOC100788643) coding protein psRNATarget
XM_003536146.3
ncRNA:24   CGGAAUCUUACAAUAUACAUUAUU   1
  |==|*|||||||||*||||||||*
targets:1038   GUUUCAGAAUGUUACAUGUAAUAU   1061

2.5 PREDICTED: Glycine max 65-kDa microtubule-associated protein 3 (LOC100777734), mRNA 65-kDa microtubule-associated protein 3(LOC100777734) coding protein psRNATarget