ncRNA ID | novel_gma_miR9042 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr9:39579789-39579884 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUUCUAAGACGGUUAUUCAAUAAC - 24 |
Stem-loop(if miRNA) |
--UAC                            AC   AA     AUA      UGAAUAACCGUCUUAGAAAGUAAGACAU  UAC  CGGUU   U      ||||||||||||||||||||||||||||  |||  |||||      ACUUAUUGGCAGAAUCUUUCAUUCUGUA  AUG  GCCAA   U CAAUA                            AA   CG     GGA |
Stem-loop sequence | UACUGAAUAACCGUCUUAGAAAGUAAGACAUACUACAACGGUUAUAUUAGGAACCGGCGUAAAAUGUCUUACUUUCUAAGACGGUUAUUCAAUAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014775518.1 |
|
0.0 | PREDICTED: Glycine max methylsterol monooxygenase 1-1-like (LOC100802435), mRNA | methylsterol monooxygenase 1-1-like(LOC100802435) | coding protein | psRNATarget | |||||||||
XM_014767461.1 |
|
2.0 | PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA | putative dual specificity protein phosphatase DSP8(LOC100787468) | coding protein | psRNATarget | |||||||||
XM_006599236.2 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC100788736 (LOC100788736), transcript variant X1, mRNA | uncharacterized LOC100788736(LOC100788736) | coding protein | psRNATarget |