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BaseInfo

ncRNA ID novel_gma_miR9042
Species Glycine max
Class miRNA
Genome position Chr9:39579789-39579884 [-]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 1 - UUUCUAAGACGGUUAUUCAAUAAC - 24
Stem-loop(if miRNA) --UAC                            AC   AA     AUA
     UGAAUAACCGUCUUAGAAAGUAAGACAU  UAC  CGGUU   U
     ||||||||||||||||||||||||||||  |||  |||||
     ACUUAUUGGCAGAAUCUUUCAUUCUGUA  AUG  GCCAA   U
CAAUA                            AA   CG     GGA
Stem-loop sequence UACUGAAUAACCGUCUUAGAAAGUAAGACAUACUACAACGGUUAUAUUAGGAACCGGCGUAAAAUGUCUUACUUUCUAAGACGGUUAUUCAAUAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775518.1
ncRNA:24   CAAUAACUUAUUGGCAGAAUCUUU   1
  *|||||||||||||||||||||||
targets:734   AUUAUUGAAUAACCGUCUUAGAAA   757

0.0 PREDICTED: Glycine max methylsterol monooxygenase 1-1-like (LOC100802435), mRNA methylsterol monooxygenase 1-1-like(LOC100802435) coding protein psRNATarget
XM_014767461.1
ncRNA:24   CAAUAACUUAUUGGCAGAAUCUUU   1
  ***=||||**||||||||||||||
targets:1931   UCGGUUGACCAACCGUCUUAGAAA   1954

2.0 PREDICTED: Glycine max putative dual specificity protein phosphatase DSP8 (LOC100787468), transcript variant X1, mRNA putative dual specificity protein phosphatase DSP8(LOC100787468) coding protein psRNATarget
XM_006599236.2
ncRNA:24   CAAUAACUUAUUGGCAGAAUCUUU   1
  *||*||**|*||||||||||||||
targets:396   AUUCUUUUAGAACCGUCUUAGAAA   419

3.0 PREDICTED: Glycine max uncharacterized LOC100788736 (LOC100788736), transcript variant X1, mRNA uncharacterized LOC100788736(LOC100788736) coding protein psRNATarget