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BaseInfo

ncRNA ID	novel_gma_miR9038
Species	Glycine max
Class	miRNA
Genome position	Chr9:47305278-47305358 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451621
Length	21
Mature sequence(if miRNA)	61 - CCUGUUUUCAAAGAUUUGUAC - 81
Stem-loop(if miRNA)	--            G       CA        UU     C   CCUGUUUUCAAA AUUUGUA  AGAAAUAG  AAAAA A   |||||||||||| |||||||  ||||||||  ||||| A   GGACAAAAGUUU UAAACAU  UCUUUGUU  UUUUU C AA            A       AA        UU     U
Stem-loop sequence	CCUGUUUUCAAAGAUUUGUACAAGAAAUAGUUAAAAACAACUUUUUUUUUUGUUUCUAAUACAAAUAUUUGAAAACAGGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006604078.2	ncRNA:21   CAUGUUUAGAAACUUUUGUCC   1   *|*|||||||||||||||||| targets:305   UUUCAAAUCUUUGAAAACAGG   325 Target Full Sequence	1.0	PREDICTED: Glycine max putative nuclease HARBI1 (LOC102660080), mRNA	putative nuclease HARBI1(LOC102660080)	coding protein	psRNATarget
XM_006604450.2	ncRNA:21   CAUGUUUAGAAACUUUUGUCC   1   |||||||*=|||||||||||| targets:59   GUACAAAGUUUUGAAAACAGG   79 Target Full Sequence	2.5	PREDICTED: Glycine max putative G3BP-like protein (LOC100812165), transcript variant X3, mRNA	putative G3BP-like protein(LOC100812165)	coding protein	psRNATarget
XM_014772170.1	ncRNA:21   CAU--GUUUAGAAACUUUUGUCC   1   *||--|||||||||||||||||| targets:1485   CUAUUCAAAUCUUUGAAAACAGG   1507 Target Full Sequence	2.5	PREDICTED: Glycine max F-box protein At5g03970-like (LOC100810374), transcript variant X2, mRNA	F-box protein At5g03970-like(LOC100810374)	coding protein	psRNATarget
XM_003554667.3	ncRNA:21   CAU--GUUUAGAAACUUUUGUCC   1   *||--|||||||||||||||||| targets:1486   CUAUUCAAAUCUUUGAAAACAGG   1508 Target Full Sequence	2.5	PREDICTED: Glycine max F-box protein At5g03970-like (LOC100810374), transcript variant X1, mRNA	F-box protein At5g03970-like(LOC100810374)	coding protein	psRNATarget
XM_014777655.1	ncRNA:21   CAUGUUUAGAAACUUUUGUCC   1   **|*|||||||||||=||||| targets:953   AGAGAAAUCUUUGAAGACAGG   973 Target Full Sequence	2.5	PREDICTED: Glycine max rop guanine nucleotide exchange factor 12-like (LOC100777496), transcript variant X2, mRNA	rop guanine nucleotide exchange factor 12-like(LOC100777496)	coding protein	psRNATarget
XM_003530118.3	ncRNA:21   CAUGUUUAGAAACUUUUGUCC   1   **|*|||||||||||=||||| targets:1090   AGAGAAAUCUUUGAAGACAGG   1110 Target Full Sequence	2.5	PREDICTED: Glycine max rop guanine nucleotide exchange factor 12-like (LOC100777496), transcript variant X1, mRNA	rop guanine nucleotide exchange factor 12-like(LOC100777496)	coding protein	psRNATarget
XM_006602077.2	ncRNA:21   CAUGUUUAGAAACUUUUGUCC   1   ***|||||||||*|||||||| targets:611   CCCCAAAUCUUUCAAAACAGG   631 Target Full Sequence	2.5	PREDICTED: Glycine max probable purine permease 9 (LOC100789651), transcript variant X3, mRNA	probable purine permease 9(LOC100789651)	coding protein	psRNATarget
BT095359.1	ncRNA:21   CAUGUUUAGAAACUUUUGUCC   1   ||*|||*|||||||||||||* targets:481   GUUCAACUCUUUGAAAACAGC   501 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-7O23 unknown mRNA	NA	coding protein	psRNATarget