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BaseInfo

ncRNA ID novel_gma_miR9036
Species Glycine max
Class miRNA
Genome position Chr17:6967794-6967935 [+]
Reference genome Glycine_max_v2.0
Source SRR1294477
Length 24
Mature sequence(if miRNA) 1 - UAAGUGAUGACGUGGUAGACAGAG - 24
Stem-loop(if miRNA) --              GU    A A       AU     C  AUA    CAU    C  A   UCACCUCA
  UAAGUGAUGACGUG  AGAC G GUGUCAC  CAUCA AC   GUCA   ACAU UC UUG        A
  ||||||||||||||  |||| | |||||||  ||||| ||   ||||   |||| || |||
  AUUCGCUACUGCAC  UUUG C CACAGUG  GUAGU UG   CAGU   UGUG AG AAC        C
UA              UG    A C       CG     A  GAG    AGC    C  A   UUUCCCCC
Stem-loop sequence UAAGUGAUGACGUGGUAGACAGAGUGUCACAUCAUCACACAUAGUCACAUACAUCUCAUUGUCACCUCAACCCCCCUUUCAAAGACGUGUCGAUGACGAGGUAUGAUGGCGUGACACCCAGUUUGUCACGUCAUCGCUUAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014766262.1
ncRNA:24   GAGACAGAUGGUGCAGUAGUGAAU   1
  ||||||=||=||||||||||||||
targets:759   CUCUGUUUAUCACGUCAUCACUUA   782

2.0 PREDICTED: Glycine max uncharacterized LOC100804377 (LOC100804377), mRNA uncharacterized LOC100804377(LOC100804377) coding protein psRNATarget