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BaseInfo

ncRNA ID novel_gma_miR9035
Species Glycine max
Class miRNA
Genome position Chr9:47779235-47779368 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 21
Mature sequence(if miRNA) 114 - UUUAUUUUCAAACUUUGACAC - 134
Stem-loop(if miRNA) --          A         U      ---        UAAU            A  -AAA      C
  GUCAAAGUUU AAAAUAAAA UAAUUU   UAAAAAAA    UCUUUCUUUUGA AG    GUUCUU C
  |||||||||| ||||||||| ||||||   ||||||||    |||||||||||| ||    ||||||
  CAGUUUCAAA UUUUAUUUU AUUAAA   AUUUUUUU    AGGAAGAAGACU UC    CAAGAA A
CA          C         U      AAA        --UU            A  GAAA      A
Stem-loop sequence GUCAAAGUUUAAAAAUAAAAUUAAUUUUAAAAAAAUAAUUCUUUCUUUUGAAAGAAAGUUCUUCCAAAAGAACAAAGCUAUCAGAAGAAGGAUUUUUUUUUAAAAAAAUUAUUUUUAUUUUCAAACUUUGACAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014772716.1
ncRNA:21   CACAGUUUCAAACUUUUAUUU   1
  |****||||||||||||||||
targets:452   GCUAAAAAGUUUGAAAAUAAA   472

3.0 PREDICTED: Glycine max nuclear ribonuclease Z (LOC100809325), transcript variant X2, mRNA nuclear ribonuclease Z(LOC100809325) coding protein psRNATarget