ncRNA ID | novel_gma_miR9035 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr9:47779235-47779368 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 21 |
Mature sequence(if miRNA) | 114 - UUUAUUUUCAAACUUUGACAC - 134 |
Stem-loop(if miRNA) |
--          A         U      ---        UAAU            A  -AAA      C   GUCAAAGUUU AAAAUAAAA UAAUUU   UAAAAAAA    UCUUUCUUUUGA AG    GUUCUU C   |||||||||| ||||||||| ||||||   ||||||||    |||||||||||| ||    ||||||   CAGUUUCAAA UUUUAUUUU AUUAAA   AUUUUUUU    AGGAAGAAGACU UC    CAAGAA A CA          C         U      AAA        --UU            A  GAAA      A |
Stem-loop sequence | GUCAAAGUUUAAAAAUAAAAUUAAUUUUAAAAAAAUAAUUCUUUCUUUUGAAAGAAAGUUCUUCCAAAAGAACAAAGCUAUCAGAAGAAGGAUUUUUUUUUAAAAAAAUUAUUUUUAUUUUCAAACUUUGACAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014772716.1 |
|
3.0 | PREDICTED: Glycine max nuclear ribonuclease Z (LOC100809325), transcript variant X2, mRNA | nuclear ribonuclease Z(LOC100809325) | coding protein | psRNATarget |