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BaseInfo

ncRNA ID novel_gma_miR9034
Species Glycine max
Class miRNA
Genome position Chr9:39296221-39296305 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 23
Mature sequence(if miRNA) 1 - CGUUUGGAUAGAGGAUUUUAACU - 23
Stem-loop(if miRNA) --           A         --CUA     A    UUUAU
  CGUUUGGAUAG GGAUUUUAA     AGAAA AUAA     C
  ||||||||||| |||||||||     ||||| ||||     A
  GUAGAUUUGUU CUUAAGAUU     UCUUU UAUU     G
UU           A         UAAUG     A    UAAAA
Stem-loop sequence CGUUUGGAUAGAGGAUUUUAACUAAGAAAAAUAAUUUAUCAGAAAAUUUAUAUUUCUGUAAUUUAGAAUUCAUUGUUUAGAUGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014768020.1
ncRNA:23   UCAAUUUUAGGAGAUAGGUUUGC   1
  |||-=||*||||||||||||||*
targets:732   AGU-GAAUUCCUCUAUCCAAACA   753

3.0 PREDICTED: Glycine max YTH domain-containing family protein 1-like (LOC100812429), transcript variant X3, mRNA YTH domain-containing family protein 1-like(LOC100812429) coding protein psRNATarget
XM_006598166.2
ncRNA:23   UCAAUUUUAGGAGAUAGGUUUGC   1
  |||-=||*||||||||||||||*
targets:1376   AGU-GAAUUCCUCUAUCCAAACA   1397

3.0 PREDICTED: Glycine max YTH domain-containing family protein 1-like (LOC100812429), transcript variant X2, mRNA YTH domain-containing family protein 1-like(LOC100812429) coding protein psRNATarget
XM_003546792.3
ncRNA:23   UCAAUUUUAGGAGAUAGGUUUGC   1
  |||-=||*||||||||||||||*
targets:1375   AGU-GAAUUCCUCUAUCCAAACA   1396

3.0 PREDICTED: Glycine max YTH domain-containing family protein 1-like (LOC100812429), transcript variant X1, mRNA YTH domain-containing family protein 1-like(LOC100812429) coding protein psRNATarget