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BaseInfo

ncRNA ID novel_gma_miR9031
Species Glycine max
Class miRNA
Genome position Chr1:37536881-37537030 [-]
Reference genome Glycine_max_v2.0
Source SRR1294477
Length 24
Mature sequence(if miRNA) 127 - UAAGUGAUGAUGUGACAGAUGGAG - 150
Stem-loop(if miRNA) --         A                   C  C      C  A    C         A       U   A GA
  UAAGUGAUG UGUGACAGAUGGAGUGUCA GU AUUACG CU AUCA UGACACCUU UUGUCAU UCA U  A
  ||||||||| ||||||||||||||||||| || |||||| || |||| ||||||||| ||||||| ||| |
  AUUCACUAC GUACUGUUUACCUCAUAGU CA UAGUGC GA UAGU ACUGUGGAA AACAGUA AGU A  G
UA         A                   A  U      A  A    A         C       C   A AG
Stem-loop sequence UAAGUGAUGAUGUGACAGAUGGAGUGUCACGUCAUUACGCCUAAUCACUGACACCUUAUUGUCAUUUCAAUGAAGGAAAUGACAUGACAACAAGGUGUCAAUGAUAAGACGUGAUUACAUGAUACUCCAUUUGUCAUGACAUCACUUAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003540779.3
ncRNA:24   GAGGUAGACAGUGUAGUAGUGAAU   1
  =||=*|||*||||||||||*||||
targets:140   UUCUUUCUCUCACAUCAUCCCUUA   163

2.5 PREDICTED: Glycine max uncharacterized LOC100792178 (LOC100792178), mRNA uncharacterized LOC100792178(LOC100792178) coding protein psRNATarget