ncRNA ID | novel_gma_miR9029 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:2417226-2417322 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 22 |
Mature sequence(if miRNA) | 1 - ACUAGGGUUCAGGACAAUAUUC - 22 |
Stem-loop(if miRNA) |
--A             C              ------CU     CACU   GG    CUAGGGUUCAGGA AAUAUUCAAUCAUG        UGGCU    GCA  A    ||||||||||||| ||||||||||||||        |||||    |||    GAUCCCAAGUCCU UUAUAAGUUAGUAC        ACUGA    CGU  C AGC             A              ACUCUCUU     ---U   AA |
Stem-loop sequence | ACUAGGGUUCAGGACAAUAUUCAAUCAUGCUUGGCUCACUGCAGGACAAUGCUAGUCAUUCUCUCACAUGAUUGAAUAUUAUCCUGAACCCUAGCGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006581374.2 |
|
2.5 | PREDICTED: Glycine max protein SENSITIVITY TO RED LIGHT REDUCED 1-like (LOC100812408), transcript variant X1, mRNA | protein SENSITIVITY TO RED LIGHT REDUCED 1-like(LOC100812408) | coding protein | psRNATarget |