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BaseInfo

ncRNA ID novel_gma_miR9029
Species Glycine max
Class miRNA
Genome position Chr1:2417226-2417322 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 22
Mature sequence(if miRNA) 1 - ACUAGGGUUCAGGACAAUAUUC - 22
Stem-loop(if miRNA) --A             C              ------CU     CACU   GG
   CUAGGGUUCAGGA AAUAUUCAAUCAUG        UGGCU    GCA  A
   ||||||||||||| ||||||||||||||        |||||    |||
   GAUCCCAAGUCCU UUAUAAGUUAGUAC        ACUGA    CGU  C
AGC             A              ACUCUCUU     ---U   AA
Stem-loop sequence ACUAGGGUUCAGGACAAUAUUCAAUCAUGCUUGGCUCACUGCAGGACAAUGCUAGUCAUUCUCUCACAUGAUUGAAUAUUAUCCUGAACCCUAGCGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006581374.2
ncRNA:22   CUUAUAACAGGACUUGGGAUCA   1
  |***|||||=||||||||||||
targets:62   GUUCAUUGUUCUGAACCCUAGU   83

2.5 PREDICTED: Glycine max protein SENSITIVITY TO RED LIGHT REDUCED 1-like (LOC100812408), transcript variant X1, mRNA protein SENSITIVITY TO RED LIGHT REDUCED 1-like(LOC100812408) coding protein psRNATarget