ncRNA ID | novel_gma_miR9027 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:19579022-19579145 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 21 |
Mature sequence(if miRNA) | 1 - ACUACAAGGACUUGGUGAACC - 21 |
Stem-loop(if miRNA) |
---   A    -     GG  A     UG  AA     AG   AG    -A    C    UUUA    ACU CAAG GACUU  UG ACCAA  AC  AGGCA  UGA  AUAU  UUAU UAGU    U    ||| |||| |||||  || |||||  ||  |||||  |||  ||||  |||| ||||    UGA GUUC CUGAG  GC UGGUU  UG  UUUGU  AUU  UGUA  AAUA AUUA    U CGU   -    U     UU  G     GU  GG     AG   AA    CG    A    UAUU |
Stem-loop sequence | ACUACAAGGACUUGGUGAACCAAUGACAAAGGCAAGUGAAGAUAUAUUAUCUAGUUUUAUUUUAUAUUAAAUAAGCAUGUAAUUAGAUGUUUGGGUUGUUGGUGCGUUGAGUCUCUUGAGUUGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006597021.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102663671 (LOC102663671), transcript variant X3, mRNA | uncharacterized LOC102663671(LOC102663671) | coding protein | psRNATarget | |||||||||
XM_006597018.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102663671 (LOC102663671), transcript variant X2, mRNA | uncharacterized LOC102663671(LOC102663671) | coding protein | psRNATarget | |||||||||
XM_006597017.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102663671 (LOC102663671), transcript variant X1, mRNA | uncharacterized LOC102663671(LOC102663671) | coding protein | psRNATarget |