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BaseInfo

ncRNA ID novel_gma_miR9027
Species Glycine max
Class miRNA
Genome position Chr1:19579022-19579145 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 21
Mature sequence(if miRNA) 1 - ACUACAAGGACUUGGUGAACC - 21
Stem-loop(if miRNA) ---   A    -     GG  A     UG  AA     AG   AG    -A    C    UUUA
   ACU CAAG GACUU  UG ACCAA  AC  AGGCA  UGA  AUAU  UUAU UAGU    U
   ||| |||| |||||  || |||||  ||  |||||  |||  ||||  |||| ||||
   UGA GUUC CUGAG  GC UGGUU  UG  UUUGU  AUU  UGUA  AAUA AUUA    U
CGU   -    U     UU  G     GU  GG     AG   AA    CG    A    UAUU
Stem-loop sequence ACUACAAGGACUUGGUGAACCAAUGACAAAGGCAAGUGAAGAUAUAUUAUCUAGUUUUAUUUUAUAUUAAAUAAGCAUGUAAUUAGAUGUUUGGGUUGUUGGUGCGUUGAGUCUCUUGAGUUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006597021.2
ncRNA:21   CCAAGUGGUUCAGGAACAUCA   1
  **||||=|||||*||||||||
targets:3611   ACUUCAUCAAGUACUUGUAGU   3631

2.5 PREDICTED: Glycine max uncharacterized LOC102663671 (LOC102663671), transcript variant X3, mRNA uncharacterized LOC102663671(LOC102663671) coding protein psRNATarget
XM_006597018.2
ncRNA:21   CCAAGUGGUUCAGGAACAUCA   1
  **||||=|||||*||||||||
targets:3597   ACUUCAUCAAGUACUUGUAGU   3617

2.5 PREDICTED: Glycine max uncharacterized LOC102663671 (LOC102663671), transcript variant X2, mRNA uncharacterized LOC102663671(LOC102663671) coding protein psRNATarget
XM_006597017.2
ncRNA:21   CCAAGUGGUUCAGGAACAUCA   1
  **||||=|||||*||||||||
targets:3605   ACUUCAUCAAGUACUUGUAGU   3625

2.5 PREDICTED: Glycine max uncharacterized LOC102663671 (LOC102663671), transcript variant X1, mRNA uncharacterized LOC102663671(LOC102663671) coding protein psRNATarget