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BaseInfo

ncRNA ID novel_gma_miR9026
Species Glycine max
Class miRNA
Genome position Chr8:1774186-1774248 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 22
Mature sequence(if miRNA) 1 - UCUCCCUCAAGGGCUUCUCGCU - 22
Stem-loop(if miRNA) ---      U           C -   UAA AU
   UCUCCC CAAGGGCUUCU G CUU   C  C
   |||||| ||||||||||| | |||   |
   GGAGGG GUUCCCGGAGA C GAA   G  C
UGA      -           U A   CAA AA
Stem-loop sequence UCUCCCUCAAGGGCUUCUCGCUUUAACAUCCAAGAACAAGACUAGAGGCCCUUGGGGAGGAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006581024.2
ncRNA:22   UCGCUCUUCGGGAACUCCCUCU   1
  =**||||||||*||||||||||
targets:887   GUAGAGAAGCCAUUGAGGGAGA   908

1.5 PREDICTED: Glycine max uncharacterized LOC102664389 (LOC102664389), mRNA uncharacterized LOC102664389(LOC102664389) coding protein psRNATarget
XM_006581024.2
ncRNA:22   UCGCUCUUCGGGAACUCCCUCU   1
  =**||||||||*||||||||||
targets:938   GUAGAGAAGCCAUUGAGGGAGA   959

1.5 PREDICTED: Glycine max uncharacterized LOC102664389 (LOC102664389), mRNA uncharacterized LOC102664389(LOC102664389) coding protein psRNATarget
XM_006581024.2
ncRNA:22   UCGCUCUUCGGGAACUCCCUCU   1
  =**||||||||*||||||||||
targets:989   GAAGAGAAGCCAUUGAGGGAGA   1010

1.5 PREDICTED: Glycine max uncharacterized LOC102664389 (LOC102664389), mRNA uncharacterized LOC102664389(LOC102664389) coding protein psRNATarget
AK243963.1
ncRNA:22   UCGCUCUUCGGGAACUCCCUCU   1
  ||**|||||||*||||||||||
targets:404   AGAAAGAAGCCAUUGAGGGAGA   425

2.5 Glycine max cDNA, clone: GMFL01-01-L17 NA coding protein psRNATarget
U64866.1
ncRNA:22   UCGCUCUUCGGGAACUCCCUCU   1
  ||**|||||||*||||||||||
targets:421   AGAAAGAAGCCAUUGAGGGAGA   442

2.5 Glycine max aluminum induced sali5-4a mRNA, complete cds NA coding protein psRNATarget
NM_001248636.1
ncRNA:22   UCGCUCUUCGGGAACUCCCUCU   1
  ||**|||||||*||||||||||
targets:421   AGAAAGAAGCCAUUGAGGGAGA   442

2.5 Glycine max sali5-4a protein (SALI5-4A), mRNA sali5-4a protein(SALI5-4A) coding protein psRNATarget
X69639.1
ncRNA:22   UCGCUCUUCGGGAACUCCCUCU   1
  ||**|||||||*||||||||||
targets:387   AGAAAGAAGCCAUUGAGGGAGA   408

2.5 G.max ADR6 mRNA NA coding protein psRNATarget
AK286109.1
ncRNA:22   UCGCUCUUCGGGAACUCCCUCU   1
  ||**|||||||*||||||||||
targets:400   AGAAAGAAGCCAUUGAGGGAGA   421

2.5 Glycine max cDNA, clone: GMFL01-22-B02 NA coding protein psRNATarget