ncRNA ID | novel_gma_miR9011 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr16:5090184-5090264 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294477 |
Length | 24 |
Mature sequence(if miRNA) | 58 - UUACGGAUCAAGUUGGUAUAUGCU - 81 |
Stem-loop(if miRNA) |
CU    A     G                   C A   A   UAUG AUCAA UUGAUCCGUAAGCCUUUUA G AUU A   |||| ||||| ||||||||||||||||||| | ||| C   GUAU UGGUU AACUAGGCAUUCGGAAAAU C UAG U UC    A     G                   A C   U |
Stem-loop sequence | CUUAUGAAUCAAGUUGAUCCGUAAGCCUUUUACGAAUUAACUUGAUCCAUAAAAGGCUUACGGAUCAAGUUGGUAUAUGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014768353.1 |
|
3.0 | PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA | CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) | coding protein | psRNATarget | |||||||||
XM_003547498.3 |
|
3.0 | PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA | CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) | coding protein | psRNATarget |