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BaseInfo

ncRNA ID novel_gma_miR9011
Species Glycine max
Class miRNA
Genome position Chr16:5090184-5090264 [+]
Reference genome Glycine_max_v2.0
Source SRR1294477
Length 24
Mature sequence(if miRNA) 58 - UUACGGAUCAAGUUGGUAUAUGCU - 81
Stem-loop(if miRNA) CU    A     G                   C A   A
  UAUG AUCAA UUGAUCCGUAAGCCUUUUA G AUU A
  |||| ||||| ||||||||||||||||||| | ||| C
  GUAU UGGUU AACUAGGCAUUCGGAAAAU C UAG U
UC    A     G                   A C   U
Stem-loop sequence CUUAUGAAUCAAGUUGAUCCGUAAGCCUUUUACGAAUUAACUUGAUCCAUAAAAGGCUUACGGAUCAAGUUGGUAUAUGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014768353.1
ncRNA:24   UCGUAUAUGGUUGAACUAGGCAUU   1
  **=||=*|=|||||||||||||||
targets:1050   CUUAUGGAUCAACUUGAUCCGUAA   1073

3.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_003547498.3
ncRNA:24   UCGUAUAUGGUUGAACUAGGCAUU   1
  **=||=*|=|||||||||||||||
targets:455   CUUAUGGAUCAACUUGAUCCGUAA   478

3.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget