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BaseInfo

ncRNA ID novel_gma_miR9006
Species Glycine max
Class miRNA
Genome position Chr8:29461105-29461178 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 22
Mature sequence(if miRNA) 53 - UAAAAAAUUAACAAUGUAGGCC - 74
Stem-loop(if miRNA) --     G     --        --     G GG  GUU
  CCUAU AUUGU  AUUUUUUA  CGGCA U  AA   U
  ||||| |||||  ||||||||  ||||| |  ||   U
  GGAUG UAACA  UAAAAAAU  GUUGU G  UU   C
CC     -     AU        AC     G UU  GUU
Stem-loop sequence CCUAUGAUUGUAUUUUUUACGGCAGUGGAAGUUUUCUUGUUUUGGUGUUGCAUAAAAAAUUAACAAUGUAGGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT096310.1
ncRNA:22   CCGGAUGUAACAAUUAAAAAAU   1
  |*|||||||||||*||||||||
targets:235   GACCUACAUUGUUCAUUUUUUA   256

1.5 Soybean clone JCVI-FLGm-9L3 unknown mRNA NA coding protein psRNATarget
XM_006573291.2
ncRNA:22   CCGGAUGUAACAAUUAAAAAAU   1
  *|=|||=|||||*|||||||||
targets:3728   UGUCUAUAUUGUAAAUUUUUUA   3749

2.5 PREDICTED: Glycine max receptor-like protein 12 (LOC102664945), mRNA receptor-like protein 12(LOC102664945) coding protein psRNATarget